Bordetella hinzii: ACR54_02013
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Entry
ACR54_02013 CDS
T04004
Symbol
alkA_2
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bhz
Bordetella hinzii
Pathway
bhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACR54_02013 (alkA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhz03000
]
ACR54_02013 (alkA_2)
03400 DNA repair and recombination proteins [BR:
bhz03400
]
ACR54_02013 (alkA_2)
Enzymes [BR:
bhz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ACR54_02013 (alkA_2)
Transcription factors [BR:
bhz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ACR54_02013 (alkA_2)
DNA repair and recombination proteins [BR:
bhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACR54_02013 (alkA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
SgrR_N
Motif
Other DBs
NCBI-ProteinID:
AKQ55330
LinkDB
All DBs
Position
complement(2048240..2049700)
Genome browser
AA seq
486 aa
AA seq
DB search
MINDAPQAWYSAFKAKDARFDGRFFVAVSSTGIYCRPVCPAKVPKPENCSFHPTAASAEQ
AGYRPCLICRPELAPGQARIDASASLARRAAKLLEDHCGSDATLDTLARRLGCTDRHLRR
VFKAELGVSPIQYMQTARLLLAKNLLTDTDLPVLDVAMAAGFGSLRRFNALFKNRYRLVP
TTLRRRKRGEPASALTLTLSYRPPYQWDAILGFLASRAIPGVEHIDNARYARAVAIDDPG
GKTHTGWIRIGHLPKKNALELQASLSLLPVLPVVLARVRHLFDLGCDPQAVHQGLSAMNT
LAPGLQTLGTRLPGSFDPFEMAVRAVLGQQITVGAARTLASRMVSHYGHPVPTGIAGLSH
AFPSPRRLLSLPGDIEDHLGPLGIIRSRARTLRALAQALAEHSLDFGPGAAPEEEVRKLL
QLPGIGPWTAQYIAMRAMAWPDAFLPTDYGIKKALAPRSPKQMTELAESWRPWRSYATIN
LWNSLH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgacgcaccccaggcatggtattccgccttcaaggcgaaggacgcgcggttc
gacgggcggttcttcgtcgccgtctcctccactggcatctactgccgcccggtctgtccg
gccaaggtgcccaagcccgagaactgcagtttccacccgaccgccgcctcggccgaacag
gctggctaccgtccttgcctgatctgccgccccgaactggccccgggccaggcgcgcatc
gacgcctccgcctccctggcccgccgggccgccaagctgctcgaagaccattgcggcagc
gacgccacgctggacacgctggcgcggcggctgggctgcaccgaccgccacctgcgccga
gtcttcaaggccgaactcggcgtctcgcccatccaatacatgcagacggcccgcctgctg
ctggccaagaacctgctcaccgacaccgacctgcccgtgctcgacgtggccatggccgcc
ggcttcggcagcctcaggcgcttcaacgcgctgttcaagaaccgctaccggctcgtcccc
accaccttgcggcgccgcaagcgcggcgagccggccagcgcgctgacgctcacgctgagc
taccgcccgccctatcaatgggacgccatcctgggctttctcgcctcgcgcgccatcccc
ggcgtcgaacacatcgacaacgcgcgctatgcccgggccgtcgccatcgatgaccccggc
ggcaagacccataccggctggatacgcatcggccatctgcccaagaagaacgcgctcgaa
ctacaagcctccctgtcgctgctgcccgtgctgcccgtcgtcctggcgcgcgtgcgccac
ctcttcgacctgggctgcgacccccaggccgtgcaccagggcctgagcgcgatgaacacc
ctcgccccgggcctgcagaccctgggcacccggctgcccggcagcttcgatccctttgaa
atggccgtgcgcgccgtcctcggccaacagatcaccgtcggcgcggcccgcaccctggcc
agccgcatggtcagccactacggccatcccgtgcccaccggcatcgcgggcttgagccac
gcctttccgtcgccgcggcgcctcctgtccctgccgggcgacatcgaagaccatctgggc
ccgctgggcatcatccgcagccgcgcccgcaccctgcgcgcgctggcccaggcgctggcc
gaacacagcctggacttcggccccggcgccgcgcccgaagaagaagtccggaaactgctg
caactgcccggcatcggcccctggacggcccaatacatcgccatgcgcgccatggcctgg
cccgacgccttcctgcccaccgactacggcattaaaaaagccttggctccgcgcagcccc
aaacagatgaccgaactggcagaaagctggcgcccctggcgcagctacgccaccatcaac
ctctggaactccctgcactga
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