Bordetella hinzii: ACR54_02576
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Entry
ACR54_02576 CDS
T04004
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bhz
Bordetella hinzii
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhz03400
]
ACR54_02576 (phrB)
Enzymes [BR:
bhz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACR54_02576 (phrB)
DNA repair and recombination proteins [BR:
bhz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACR54_02576 (phrB)
Prokaryotic type
ACR54_02576 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AKQ55891
LinkDB
All DBs
Position
2677401..2678846
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AA seq
481 aa
AA seq
DB search
MTPLSSSRPTTMQTLVWLRSDLRLHDNPALAAAAAQGPVRAVFLAAPGQWRAHGDAPAKV
DFWRRNVLALGRSLGELGIALDVLPVHDWSQAPQALAGFCATHDIGAVHVNAEWALNEQR
RDQACDARLRVAGITFTRHHGATLLPPGSVRTGKGDPYRVFTPYARACREILRAAPPAAV
RAPKAQGPAREMPPLPASWPESAHTLAALWPAGEAHAHERLRAFLDKDLARYHERRDLPA
VPGTSALSPYLACGVLSPAQCLRAALRANQGEIDTGQAGARAWITELLWREFYQHLLAAY
PGLSMHQPMRPETARLAWRDAPQDLAAWQAGRTGIPIVDAAQRQLLATGWMHNRLRMVSA
MFLSKNLLIDWRLGEAWFMNHLVDGDLAANNGGWQWSASTGADAVPYFRVFNPVTQSRRF
DPDAVFLRRWLPELAGLDDKAIHDPTADERRAAGYPEAIVDLKHSRLRAIEAYARLPSAQ
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccctgtcctcttcccggccgacgacgatgcaaaccctggtctggctgcgcagc
gatctgcgcctgcacgacaacccggcgctggccgcggccgccgcccaaggaccggtccgc
gccgtgtttctcgccgcgcctggccaatggcgcgcgcatggcgacgctcccgccaaagtg
gatttctggcgccgcaatgtgctggcgctgggccggtcgctgggcgagctgggcatcgcg
ctggacgtgctgccggtgcacgactggtcgcaggcgccgcaagcgctggccggtttctgc
gccacgcatgacatcggcgcggtccacgtcaatgccgaatgggcactcaatgagcagcgc
cgcgaccaggcctgcgatgcccggctgcgcgttgcgggcatcaccttcacgcgccaccat
ggcgccaccctgctgccgccgggcagcgtgcgcacgggcaagggagacccctaccgggtg
ttcaccccctatgcgcgcgcctgccgcgagattctgcgcgccgcgccgcctgccgcggtg
cgcgcccccaaggcccagggccccgcccgcgagatgccgcccctgcctgcgagctggccc
gaaagcgcccacaccctggccgcgctctggccggctggcgaagcccatgcccacgaacgc
ctgcgggccttcctggacaaagacctggcgcgctatcacgaacgccgcgacttgccggcc
gtgccgggcaccagcgccctgtcgccctatctggcctgcggcgtgttgtcgccggcccaa
tgcctgcgcgccgcgctgcgcgccaaccagggcgagatcgacaccggccaggccggcgcg
cgcgcgtggatcaccgaattgctgtggcgcgagttctaccagcatctgctggcggcctat
cccggcctgtccatgcaccagcccatgcgtccggaaaccgcccgcctggcctggcgcgat
gcgccccaggacctggctgcctggcaagccggccgtaccggcatacccatcgtcgacgcc
gcgcagcgccagttgctggccaccggctggatgcacaaccggctgcgcatggtgagcgcc
atgtttctgtccaagaatctcttgatcgactggcgcctgggcgaggcctggttcatgaac
cacctggtggacggcgacctcgcggccaacaacggcggctggcaatggagcgcctccacg
ggcgcggacgccgtgccttatttccgcgtcttcaatccggtcacccaatcgcgcagattc
gatccggacgcggtgttcctgcggcgctggctgcccgagctggccggcctggacgacaag
gccatccacgaccccacggcggacgagcgccgcgccgccggctatcccgaggccatcgtc
gatctgaagcacagccggctgcgcgccatcgaggcctacgcgcgcctgccctcggcgcag
ccctga
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