Bordetella hinzii: ACR54_03482
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Entry
ACR54_03482 CDS
T04004
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
bhz
Bordetella hinzii
Pathway
bhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACR54_03482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhz03021
]
ACR54_03482
03019 Messenger RNA biogenesis [BR:
bhz03019
]
ACR54_03482
Transcription machinery [BR:
bhz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACR54_03482
Messenger RNA biogenesis [BR:
bhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACR54_03482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AKQ56777
UniProt:
A0AAN1RXE6
LinkDB
All DBs
Position
3629009..3630265
Genome browser
AA seq
418 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVTPETIKHRIMFENLTPLHPNQVMRLERDIKSEENLTGRILDIFAPIGKGQRGLIVAPP
KSGKTVMMQHIAHAITTNYPDAVLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIQSMEFIVDKMRATKTNAEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaatgaactgaaggcgctgcacgtgtcgcagctgctggaaatggccgctggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagttgatgttcgccatcatgaag
cggcgcgccaagcaaggcgagcagatcttcggcgacggcgtcctggaagtcctgcccgac
ggtttcggtttcctgcgctcgccggagacctcgtatctggccagtaccgacgacatctat
atctcgccgtcccagatccgccgcttcaacctgcatacgggcgactccatcgaaggcgaa
gtccgcacgcccaaggacggcgaacgctacttcgccctggtcaaggtcgacaaggtcaac
ggcgtcacgcccgagaccatcaagcaccgcatcatgttcgagaacttgacgccgctgcac
cccaaccaggtgatgcgcctcgaacgtgatatcaagagcgaagaaaacctcaccggccgt
atcctggatatcttcgcccctatcggcaagggccagcgcggcctgatcgtcgccccgccg
aagtccggcaagacggtgatgatgcagcacatcgcgcatgccatcaccaccaactacccg
gatgccgtcctgatcgtcctgctggtcgatgagcgccccgaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgagatgaaaaaggacgtg
gtcatcctgctggattcgatcacccgcctggcccgcgcctacaacaccgtcgtccccgcc
tcgggcaaggtgctgaccggcggcgtggacgccaacgccctgcaacgccccaagcgcttc
ttcggcgcggcgcgcaatctcgaggaaggcggctcgctcaccatcctgggcaccgcgctg
atcgaaaccggcagccgcatggatgaagtcatctatgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgccgcctggccgagaagcgcgtctacccggccatcaacctg
aacaagtcgggcacccgccgcgaagagctgctgatcaagcccgagctgctgcaaaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaaatccaatccatggaattcatcgtg
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaagtaa
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integrated database retrieval system