KEGG   Bordetella hinzii: ACR54_03482
Entry
ACR54_03482       CDS       T04004                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
bhz  Bordetella hinzii
Pathway
bhz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACR54_03482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhz03021]
    ACR54_03482
   03019 Messenger RNA biogenesis [BR:bhz03019]
    ACR54_03482
Transcription machinery [BR:bhz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACR54_03482
Messenger RNA biogenesis [BR:bhz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACR54_03482
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 NACHT S1CSD-TOTE-2 ResIII AAA_22 AAA
Other DBs
NCBI-ProteinID: AKQ56777
UniProt: A0AAN1RXE6
LinkDB
Position
3629009..3630265
AA seq 418 aa
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVTPETIKHRIMFENLTPLHPNQVMRLERDIKSEENLTGRILDIFAPIGKGQRGLIVAPP
KSGKTVMMQHIAHAITTNYPDAVLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIQSMEFIVDKMRATKTNAEFFDMMKK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgcacctcaatgaactgaaggcgctgcacgtgtcgcagctgctggaaatggccgctggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagttgatgttcgccatcatgaag
cggcgcgccaagcaaggcgagcagatcttcggcgacggcgtcctggaagtcctgcccgac
ggtttcggtttcctgcgctcgccggagacctcgtatctggccagtaccgacgacatctat
atctcgccgtcccagatccgccgcttcaacctgcatacgggcgactccatcgaaggcgaa
gtccgcacgcccaaggacggcgaacgctacttcgccctggtcaaggtcgacaaggtcaac
ggcgtcacgcccgagaccatcaagcaccgcatcatgttcgagaacttgacgccgctgcac
cccaaccaggtgatgcgcctcgaacgtgatatcaagagcgaagaaaacctcaccggccgt
atcctggatatcttcgcccctatcggcaagggccagcgcggcctgatcgtcgccccgccg
aagtccggcaagacggtgatgatgcagcacatcgcgcatgccatcaccaccaactacccg
gatgccgtcctgatcgtcctgctggtcgatgagcgccccgaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgagatgaaaaaggacgtg
gtcatcctgctggattcgatcacccgcctggcccgcgcctacaacaccgtcgtccccgcc
tcgggcaaggtgctgaccggcggcgtggacgccaacgccctgcaacgccccaagcgcttc
ttcggcgcggcgcgcaatctcgaggaaggcggctcgctcaccatcctgggcaccgcgctg
atcgaaaccggcagccgcatggatgaagtcatctatgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgccgcctggccgagaagcgcgtctacccggccatcaacctg
aacaagtcgggcacccgccgcgaagagctgctgatcaagcccgagctgctgcaaaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaaatccaatccatggaattcatcgtg
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaagtaa

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