Bordetella hinzii: ACR54_04527
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Entry
ACR54_04527 CDS
T04004
Symbol
rhlE_3
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bhz
Bordetella hinzii
Pathway
bhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACR54_04527 (rhlE_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhz03019
]
ACR54_04527 (rhlE_3)
Enzymes [BR:
bhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACR54_04527 (rhlE_3)
Messenger RNA biogenesis [BR:
bhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACR54_04527 (rhlE_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AKQ57800
UniProt:
A0A0H4W6V1
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All DBs
Position
4774004..4775500
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AA seq
498 aa
AA seq
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MSDRLPLELFLTTSSSFADLGLADSLLRAIAETGYTAPTPIQAQAIPQVLRGGDLLAAAQ
TGTGKTAGFTLPILHLLSQRKPAKRMAGRPRCLILTPTRELTAQVAESVQVYGKHTGLTS
MVMFGGVNINPQITALRKPLDILVATPGRLLDHAGQKTVDLSGVEILVLDEADRMLDMGF
IRDIRKVLALLPKSRQNLLFSATFSDEIRELARGVLNDPGEVSVTPRNTATELVTQTVHI
VEQAHKRDLVSHLIRESGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTR
ALAGFKDGSVAVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGAAV
SLVDSSEIKLLKAIERLIKKTIERKTVDGWTPPVGVAAEPEPQDDEERGFGRRNGRGAPG
GRNGGNRGGGHRPGGEARAPRPARSAEGRPAAPKPAAPKPAAPKPAATRPAAGAQPARRP
ESGNRPARGPARGVLLGK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaggctgccgctggagttgtttttgactacctcttcttcttttgccgacctc
gggctggctgattccctgttgcgtgcgatcgccgagaccggctataccgcgcccacgccc
atccaggcccaggccatcccgcaggtgctgcgcggcggcgacctgctggccgccgcccag
accggcaccggcaagaccgccggcttcaccctgcccatcctgcatctgctgtcgcagcgc
aaacccgccaagcgcatggccggccggccacgctgcctgatcctgacccccacccgcgag
ctcaccgcccaggtggccgagtccgtccaggtctacggcaagcacaccggcctcacctcg
atggtgatgttcggcggcgtgaacatcaacccgcagatcacggccctgcgcaagcccctg
gacatcctggtggccacgcctggccgtctgctggaccacgccggccagaaaaccgtcgat
ctctcgggcgtcgagatcctggtgctcgacgaggccgaccgcatgctggacatgggtttc
atccgcgatatccgcaaggtgctggccctgctgcccaagtcacgccagaacctgctgttc
tcggccaccttctccgacgagatccgcgagctggcccgcggcgtgctgaacgatccgggc
gaggtctccgtaaccccgcgcaataccgccaccgagctggtcacgcagaccgtgcacatc
gtcgagcaggcccacaagcgcgacctggtcagccacctgatccgcgaaagcggctggcac
caggtgctggtcttcacccgcaccaagcacggcgccaaccgcctggccgaaaaactcgtc
aaggacggcctgtcggccgccgccatccatggcaacaagagccaatcggcgcgcacgcgc
gcgctggccggcttcaaggacggcagcgtggccgtcctggtggccaccgacatcgcggcg
cgcggcctggacatcgatcaattgccccaggtggtcaatttcgaactgcccaacgtgccc
gaagactacgtgcaccgcatcggccgcaccggccgcgccggcgccacgggcgcggctgtc
tcgctggtcgacagcagcgagatcaagctgctcaaggccatcgagcgcctgatcaagaaa
accatcgaacgcaagacggtcgacggctggacgccgccggtgggcgtggcggccgagccc
gagccgcaagacgacgaagaacgcggcttcggccgccgcaacggccggggcgcgcccggt
ggccgcaacggcggcaaccgcggaggcggccaccgtcctgggggcgaagcgcgcgcgccg
cgtccggcccgcagcgccgaaggccgcccggccgcgcctaagccggccgcgcctaagccg
gccgcgcctaagccggccgcaacccggccggcggctggcgcccagcccgctcgccgcccc
gaaagcggcaatcgcccggctcgcggtcccgcgcgcggggtgctgctcggcaagtaa
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