Bizionia sp. M204: GMA17_01265
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Entry
GMA17_01265 CDS
T08096
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bia
Bizionia sp. M204
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bia03032
]
GMA17_01265 (gyrB)
03400 DNA repair and recombination proteins [BR:
bia03400
]
GMA17_01265 (gyrB)
Enzymes [BR:
bia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GMA17_01265 (gyrB)
DNA replication proteins [BR:
bia03032
]
Prokaryotic type
DNA Topoisomerases
GMA17_01265 (gyrB)
DNA repair and recombination proteins [BR:
bia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GMA17_01265 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UPS90428
LinkDB
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Position
267569..269518
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AA seq
649 aa
AA seq
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MSEKREEFNKDNYSADSIQALEGMEHVRMRPSMYIGDTGTRGLHHLVYEVVDNSIDEALA
GHCDNISVTINEDNSITTEDDGRGIPVDMHKKEGVSALQVVMTKIGAGGKFDKDSYKVSG
GLHGVGVSCVNALSDHLKATVYRKGEIWEQEYEKGKAMYPVKKVGETDKRGTIVTFKPDP
TIFTQTLEYSYDTLASRLRELAYLNKGITIHLIDKRHKKDNGEFEGETFHSKEGLKEFIK
FLDGNREPLTKEVIAFEGEKNGVPVEVAMIYNTSYAENLHSYVNNINTHEGGTHLSGFRR
GLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSA
SVSQAVSEMLTDYLEEHPEDAKVIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKL
SDCSEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHKVFENEEI
KNIFTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADIDGSHIETLILTFFFRYMKELIE
NGHIYIATPPLYLVKKGAKKQYAWSDEERSRIMADFGENAKIQRYKGLGEMNAEQLWDTT
MNPEFRTLRQVQIDNGLEADRIFSMLMGDEVPPRRDFIEKNAIYANIDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaagagaagaatttaacaaagataactattcagcagatagtattcaggca
ttagaaggcatggagcacgtgcgcatgcgaccttccatgtatattggagatacgggtacg
cgtggtttgcaccatttagtgtatgaggtggtggataactctattgatgaagctttagct
ggtcattgtgataatattagtgttaccataaatgaggataactccataacaaccgaagat
gacggtcgtggtattcctgtagatatgcacaaaaaagaaggcgtttccgcattacaagtg
gttatgactaaaattggtgcaggtggtaagtttgataaagattcctataaggtttctggt
ggtttgcatggtgtaggtgtgagttgtgtgaacgcattatcagaccatttaaaagcaacc
gtttacagaaaaggtgaaatctgggagcaagaatacgaaaaaggtaaagccatgtatcct
gttaaaaaggtaggtgaaactgataagcgtggaactatcgttacctttaaaccagatcca
acaatttttacacaaactttagagtatagttacgataccttggcaagtcgtttgcgtgaa
ttggcatatttaaataaaggtatcacgattcacttaattgacaaacgtcataaaaaagat
aatggtgaatttgaaggcgaaacatttcattctaaagaaggtttaaaagaatttattaag
tttttagatggaaaccgtgagccattaaccaaagaagttattgcttttgaaggtgaaaaa
aatggcgttccagttgaggttgctatgatttataatacatcatacgctgaaaatttgcac
tcctatgtaaacaacattaatacacatgaaggtggaacccatttatctggtttccgtcgt
ggattaacacatacccttaaaaagtatgccgatgaatctggtatgcttgataaattaaaa
tttgatattgcaggtgatgatttccgtgaaggattaacagctattatttctgtaaaagtt
caagagccacaatttgaaggacaaactaaaaccaaattaggaaaccgtgaggtgtctgct
tcggtaagtcaggcggtttctgaaatgttaaccgactatttagaggaacatccagaggat
gctaaggttattgttcaaaaagtaattctagcggctcaagcacgtcatgcagctcaaaaa
gcacgtgaaatggttcaacgtaaaacggtaatgagtattggtggtttgccaggaaaatta
tccgactgttcagaacaagatccagctaaatgtgaagtgtttttagttgagggagattcg
gcaggtggaacggccaaacaaggtcgtgatcgtgcttttcaggctattttgccattacgt
ggtaagattttaaatgtggaaaaagccatgactcacaaggtttttgaaaatgaggaaatc
aagaatatctttactgcacttggtgtaactattggtactgaagaggatagtaaagcttta
aacctttctaaactgcgttatcataaagtggtgataatgtgtgatgccgatattgatggt
agtcacattgaaactttaattctgacattcttctttagatatatgaaagaattaattgaa
aacggtcatatttatattgcaacaccgcctttatatttagttaaaaaaggtgctaaaaaa
caatatgcttggtctgatgaagaacgatctagaattatggcagattttggtgaaaatgcc
aaaattcaacgttataaaggtcttggggaaatgaatgcggagcaattatgggatacaacc
atgaatccagaatttagaaccttaagacaagtacaaatagacaacggattggaagcggat
agaatcttttctatgttaatgggagacgaagttccacctcgaagagattttattgaaaag
aatgctatttatgcaaatattgatgcttaa
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