Bizionia sp. M204: GMA17_08410
Help
Entry
GMA17_08410 CDS
T08096
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bia
Bizionia sp. M204
Pathway
bia03030
DNA replication
bia03430
Mismatch repair
bia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMA17_08410
03430 Mismatch repair
GMA17_08410
03440 Homologous recombination
GMA17_08410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bia03032
]
GMA17_08410
03400 DNA repair and recombination proteins [BR:
bia03400
]
GMA17_08410
Enzymes [BR:
bia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMA17_08410
DNA replication proteins [BR:
bia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GMA17_08410
DNA repair and recombination proteins [BR:
bia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GMA17_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Peptidase_M9
Motif
Other DBs
NCBI-ProteinID:
UPS91739
LinkDB
All DBs
Position
complement(1878052..1878828)
Genome browser
AA seq
258 aa
AA seq
DB search
MKLNLTKPICFFDLETTGISITSDRIVEIAILKVHPNGKEESTRWLVNPEMPIPAEVTAI
HGISDADVANAPTFKELAKEVNQMIKDSDLGGFNSNRFDIPLLAEEMLRADVDFDMKNRV
SVDVQTIFHKMEQRTLSAAYKFYCNETLEGAHSAEADTNATYEVLKAQIAKYDTLENDTQ
FLAEFSSRKKFADFAGFIAYNKQGEECFSFGKHKGKLVTEILEKEPGYFGWLLNADFPLY
TKKVLTAIKLRAFNNKLD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaatcttaccaaacccatttgttttttcgatttagaaacaaccggaatcagt
atcacttctgataggattgtagaaatagccatcttaaaagttcacccaaatggaaaagaa
gaatctacacgttggttggtaaatccggaaatgcctattccggcagaagttactgctatt
cacggtatttcagatgctgatgttgccaatgccccaaccttcaaagaattggccaaggag
gtgaatcagatgattaaagattcagatttaggtggttttaattctaaccgatttgatatt
ccacttttagccgaagaaatgttacgcgctgatgtggattttgacatgaaaaatcgcgta
tctgtggatgtgcaaaccatatttcataaaatggagcaacgtacattaagtgcggcttac
aaattctactgtaatgaaactttagaaggagcgcatagtgctgaagcagataccaatgcc
acatacgaagttcttaaagcgcaaatagcaaagtatgacacgctagaaaacgatacacag
tttttagcagaatttagctcgcgcaaaaagtttgcagattttgctggttttattgcatat
aataagcaaggtgaagagtgtttttcttttggaaaacataaaggcaaattagtaactgaa
attttagaaaaggaaccaggctatttcggttggttgctaaatgctgattttccattatat
actaaaaaagtattgacagctattaaattaagagcctttaataataaattggattag
DBGET
integrated database retrieval system
