Bizionia sp. M204: GMA17_10040
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Entry
GMA17_10040 CDS
T08096
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bia
Bizionia sp. M204
Pathway
bia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GMA17_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bia03019
]
GMA17_10040
03016 Transfer RNA biogenesis [BR:
bia03016
]
GMA17_10040
Enzymes [BR:
bia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GMA17_10040
Messenger RNA biogenesis [BR:
bia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GMA17_10040
Transfer RNA biogenesis [BR:
bia03016
]
Prokaryotic type
tRNA degradation factors
GMA17_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
UPS92040
LinkDB
All DBs
Position
2204223..2206478
Genome browser
AA seq
751 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYEQKDLNFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDENVMPDAMAGLAASAAIQLSDLPFECPISEARVGRINGEFIINPTLAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMADAIKFAHEAIKIQCEAQVRLAEAFGKKAVREYEPERT
DEDLEKKVYDMAYDKVYAIAKAGSAKHERSDAFQQIKEDIKATFSEEELEDYGGLVSEYY
HKAEKAAIRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSALFTRGETQALATVTLG
TSRDANQIDMPSQEGEERFYLHYNFPPFCTGEARPIRGTSRREVGHGNLAQRALKGMVPD
ESPYTVRIVSEVLESNGSSSMATVCAGTMALMDAGVQMIKPVSGIAMGLISDAASGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAREGRLHILEKL
VETIAKPNAEVKEHAPTMVTRRIPNEFIGALIGPGGKVIQEMQKETDTTIVINEDPVTEE
GIVEILGVGKKGIDAVMAKIDAILFKPTVGSIYEVKVIKMLDFGAVVEYTDAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGIDSRTRKEKVSRKAILPKPEGFVERPPRDDKR
SGGRDNRGSRDNNRGRDNRRDDRKPRDDKKD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttagagaggtcattgaccttggtgatggcagagaaatttccatc
gaaacaggaaaattagcaaaacaagctcacggtagcgttgttgtgcagtcaggaaaatgt
atgttattatgtacagttgtttccaactacgaacaaaaagaccttaattttttaccctta
acggtagattatcgtgaaaaatttgctgctgcaggtcgttacccaggaggcttctttaaa
agagaagcaagacctagtgatggcgaagtattaaccatgcgtttagtagatcgtgtttta
cgtccattattcccaaaagattatcattctgaaacacaggtgatgattcaattaatgtct
catgacgaaaatgttatgccagacgctatggctggattagctgcttctgctgctattcaa
ttatccgatttaccttttgaatgtccaatctctgaagcacgagttggccgtattaatggt
gaattcattattaacccaacattggcgcaattagcagaatctgatattgacatgatgatt
ggtgcttctgctgactctgtaatgatggtggaaggtgaaatggatgaaatttctgaagaa
gaaatggcagatgctattaaatttgcccatgaagctattaaaattcaatgtgaagctcaa
gtaaggttagctgaagcatttggaaaaaaagccgttcgtgaatatgaaccagaaagaacc
gatgaagatttagagaaaaaagtgtatgacatggcttacgataaagtgtatgctattgca
aaagctggatcggctaaacatgaaagaagtgatgcatttcaacaaataaaagaagatatt
aaagccacattttctgaagaagaattagaagattacggcggattagtatctgaatattac
cacaaagctgaaaaagcagctattcgtgatttaaccttaaatgaaggattgcgtttagat
ggtagaaaaacggatgaaattagaccaatttggtgtgaagtagattacttaccatctaca
cacggttctgctctttttacacgtggagaaacacaagctttagctacagtaactttagga
acatctagagatgctaatcaaatagatatgccatcgcaagaaggtgaagagcgtttctat
ttacattataacttcccaccattttgtacaggtgaagcaagaccaattcgtggaacttct
cgtagagaggtaggtcatggtaacttggcgcaacgtgctttaaaaggaatggtaccagat
gaaagtccgtatactgtacgtatagtttcagaagtattggaatctaacggctcctcttct
atggcaactgtttgtgcaggaactatggcactaatggatgctggtgtacaaatgattaag
cctgtatctggtattgctatgggattaatttctgatgctgcttctggtaaatatgctgta
ttatctgatattttaggtgatgaagatcatttaggagatatggattttaaagtaacagga
actgcagatggtattactgcttgccaaatggatattaaagtaaaaggtctttcttatgag
attttagtaaatgcattaaaacaagctcgtgaaggccgtttacatattttagaaaaacta
gttgaaacaattgctaaaccaaatgcagaagttaaggaacatgctccaactatggtaacc
agacgtattcctaacgaattcattggggctttaattggacctggtggaaaagtgattcag
gaaatgcaaaaagaaaccgatacaaccattgttattaacgaagatcctgtaacggaagaa
ggtattgttgaaatattaggcgttggtaaaaaaggtattgatgcggttatggcaaaaatt
gatgctattctattcaaacctacagttggcagcatatatgaagtaaaagtcattaaaatg
ttagattttggtgccgttgtggagtatacagatgcacctggaaacgaagtgttattacac
gtaagcgaattagcttgggaacgtacagaaaatgtatctgatgtggtaaacatgggcgat
gtttttgatgtgaagtatttcgggatagattctagaacacgtaaagaaaaagtatcgcgt
aaggctattttaccaaaaccagaagggtttgtagaaagaccaccaagagacgacaaacgt
tcaggtggacgtgataacagaggttctcgtgacaacaacagaggtcgtgataatcgtcgt
gatgacagaaaaccaagagacgacaagaaggactaa
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