Bizionia sp. M204: GMA17_11005
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Entry
GMA17_11005 CDS
T08096
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bia
Bizionia sp. M204
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bia03032
]
GMA17_11005
03400 DNA repair and recombination proteins [BR:
bia03400
]
GMA17_11005
Enzymes [BR:
bia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GMA17_11005
DNA replication proteins [BR:
bia03032
]
Prokaryotic type
DNA Topoisomerases
GMA17_11005
DNA repair and recombination proteins [BR:
bia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GMA17_11005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RBB1NT
Motif
Other DBs
NCBI-ProteinID:
UPS92213
LinkDB
All DBs
Position
complement(2389251..2390234)
Genome browser
AA seq
327 aa
AA seq
DB search
MYFRKKHGKGFRYVDGSNTTVKDKKLKDWFKSLVIPPAWTDVEINTKKHAKILVTGRDDK
DRKQYIYNQEFVEKRNQEKFDRILKFAEQLEHMRRVTGQHLRKRSLTREKVLACMVRLLE
AAYFRPGSDYYTQENETYGLTTMRSKHLNIEGDELIFSYVGKSGKKQERNIVDEKLAKIV
QEIDDLPGYEIFKFIDENGAKQDVKSEHLNDYIKEVMGEAFSAKDFRTWSGTVIAAMALD
EIGALEEEDQQMLDKNIRDAVVRVSEHLGNTPSVARSSYIDPRVIDEYTHGKTINYFQNE
VNRLIKENKNLSREELGVLCMLKKKLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtactttagaaaaaaacatggaaagggatttcggtatgtagatggttccaataccacc
gttaaggataaaaaactgaaagattggtttaaatctttagttatcccaccggcttggact
gatgtggaaataaacacgaaaaagcatgctaaaattttagttacaggtcgagatgataag
gatagaaagcaatatatctataatcaagaatttgtagaaaaacgaaatcaagagaaattt
gatcggattctcaaatttgcagaacaattggaacacatgcgccgtgttacaggtcagcac
ctccgaaaacgctccttaaccagagaaaaggttttagcatgcatggttcgtttgctagaa
gcagcttactttaggccgggtagtgattactatactcaagaaaatgaaacctatggttta
acaaccatgcgtagtaaacatttgaatattgaaggcgacgaattgatttttagttatgta
ggtaaatctgggaaaaagcaagaacgaaatatcgtggatgagaagcttgcaaaaatagta
caagaaatagatgatttgcccggttatgaaattttcaaatttattgatgaaaatggggcg
aagcaagacgtaaaaagcgaacatttaaacgactatataaaagaagttatgggcgaagcg
ttttcggctaaagattttagaacttggtcgggaaccgtaattgccgctatggctttggat
gaaattggagctttagaagaggaggaccaacaaatgttggataaaaacattcgtgacgcc
gtagtgcgtgttagtgagcatttaggaaatacaccgtccgtggccagaagttcatatatt
gatccacgcgtaattgatgaatatacacatggaaaaactattaattattttcaaaatgaa
gttaaccgattaattaaggaaaataaaaatctatctcgagaggaactaggtgttttatgt
atgctgaagaaaaaattgaaataa
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