Bizionia sp. M204: GMA17_12925
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Entry
GMA17_12925 CDS
T08096
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bia
Bizionia sp. M204
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bia01011
]
GMA17_12925
Enzymes [BR:
bia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GMA17_12925
Peptidoglycan biosynthesis and degradation proteins [BR:
bia01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GMA17_12925
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
UPS92573
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Position
complement(2811430..2813025)
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AA seq
531 aa
AA seq
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MNCFTKNNIRLSLSAIFIAVGITYAQDSIPKKIVKTHIPEEQLIAGESYEVDTIIDGQQF
YKKQIEIETDSVDIKALKDLEFTAELDEKWREELYSNALYDTLYTAISELDYKEVYYPDL
PTDTLKARLDRLNARTPFNIAYNPSLESVIKGFLKNRRGYFERLMGLSHFYFPMFEQELD
AQDVPLEVKYLAIVESALKPRARSRVGATGLWQFMFATGKEYGLNVSSYVDERSDPIKST
KAAAKYLAALYSMFGDWDLALAAYNSGPGNVLKAIRRSGGYENYWNIRHNLPRETAGYLP
AFLATMYIFEYAEEHGLVAEKPAFHHFETDTIHVKQMITLDQVSEATGVNIEELQFLNPS
YKLDIIPFIPEENYSLRLPLTAVGTFVTNEDTIYKSAKAELDEREKPLPQFFDSQSKERY
RVKSGDYLGLIARKYGVRVSQIKQWNGLRSNNLRIGQRLTIYPRNPVPQASSSNNSSSSK
STPKTYIVKSGDSLWSISQKFPGVSVQNIRDWNDISGNNLKPGMSLKLSKG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgaattgttttactaaaaataacatacgtttaagtctttctgcaatatttattgctgtg
ggaataacctatgcgcaagattctattcccaagaaaattgtaaaaacgcatattcccgaa
gagcaattaattgctggtgaatcttatgaagtggacaccataattgatggtcaacaattt
tacaaaaagcagattgaaatagaaaccgactctgttgatataaaagcccttaaagattta
gaatttacagcagaattagatgaaaaatggcgggaagaattatatagcaacgctttgtac
gataccctttatacagccatttcagaattagattataaggaagtttattatccagattta
ccaaccgatactttaaaggcacgtttagatcgcttaaatgctagaacaccttttaatatt
gcgtacaatccatctttagaaagtgttataaaaggatttttaaaaaataggcgtggttat
tttgagcgactcatggggttgagtcacttctatttccctatgtttgagcaagagttggat
gcacaagatgtgcctttggaggttaagtatttagccattgtagaatccgctttaaaacca
cgagcacgatcacgtgtaggtgcaacaggtttatggcagtttatgtttgccacaggaaaa
gaatatggtttaaatgtgagtagttatgtagatgaacgtagcgacccaataaaatctacc
aaagcagcagctaaatatttggctgccttgtattctatgttcggagattgggatttggca
ttagcagcgtataattcgggaccaggaaatgtattaaaagctattagacgatcaggtggt
tatgaaaattactggaatattcgtcataatttaccacgtgaaacagcgggatatcttcct
gcatttttggcaaccatgtatatttttgaatatgctgaagaacacggattagttgctgaa
aaaccagcatttcatcattttgaaaccgatacaattcatgtaaagcaaatgattacttta
gatcaggtttcagaagcgacaggtgttaatatagaagaattacaatttttaaacccatcc
tacaaattagatattattccctttattccagaggaaaactattcattacgattgccacta
acagctgttggaacatttgtaactaacgaggatactatttacaaatctgcgaaggctgaa
ttggatgaacgggaaaaaccattaccacaattttttgatagtcaaagtaaagaacgatat
cgcgttaaatctggagattatttaggcttaatagctaggaaatatggtgttcgcgtaagt
caaataaaacaatggaacggtttgcggagtaataatttacgtattggacagcgtttaact
atatacccaagaaatcctgttccacaggcaagcagttctaacaactcaagtagttcaaaa
tcaacgccaaaaacctatattgtaaagagtggtgactcgctttggagtatttcacaaaaa
tttccaggcgtttctgttcaaaatattcgagattggaacgatattagtggtaacaattta
aaaccaggaatgtcattaaaactttccaaaggctaa
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