Bizionia sp. M204: GMA17_14705
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Entry
GMA17_14705 CDS
T08096
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bia
Bizionia sp. M204
Pathway
bia02020
Two-component system
bia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GMA17_14705 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GMA17_14705 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bia03021
]
GMA17_14705 (rpoN)
Transcription machinery [BR:
bia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GMA17_14705 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
UPS92897
LinkDB
All DBs
Position
complement(3229173..3230633)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQFLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKESLEDEYDDD
FDNSQDNYDDTETINTEDINVDEYLSDDEVPDYRTQANNYSADDEEKTMPYAAGTSFTQH
LKNQLNTFRLNDEEREIAEFLVGSVDESGYIRRELIDITDDLAFTQNVYTTEDKIEAVLK
VVHQLDPAGVGARNLQECLSIQLHRKQKNPDVELAIEIIDTAFEQFTKKHYKKLIQKFDI
TEIQLKDAIHVIEHLNPKPGGSYAGNNRIVEHVVPDFAIRIVDGELELTLNGRNAPELHV
SREYSNMMKGYKESKEKSKSQKDAVQFIKQKLDAAKWFIEAIRQRQQTLFVTMSSIMHYQ
KEYFLTGDERKLRPMILKDIADEIEMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMTND
QGEEVSTREIKKILETVIEDENKRKPMTDDALAKILKEKGYPIARRTVAKYREQLDIPVA
RLRKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcaatttttacaatttaaattatcacagaagctttcgccgcagcagattcaa
ttaatgaaattgattcagttacctacgcaggcatttgagcaacgcttaaaacaagagtta
gaagaaaacccagcacttgaaagtggtaaagagtctttagaagatgagtacgatgatgat
tttgataacagtcaagacaattatgatgatactgaaaccatcaacaccgaagacattaat
gttgatgagtatttaagtgatgacgaagttcccgattaccgtacccaagctaataattac
agtgctgatgatgaggaaaaaaccatgccgtatgccgcaggaacctcctttacgcaacat
ttaaaaaaccagttaaacacgtttcgtttaaatgacgaagagcgtgaaatagcggagttt
ttagtaggaagtgttgatgaaagtggttatatccgacgggaattaatagatattacagac
gatttagcctttacacaaaatgtgtacaccacagaagataaaattgaagccgtattaaaa
gtggtccatcaattggatcctgcaggtgttggtgcgcgtaatctgcaagaatgtttaagc
attcaattgcatagaaaacaaaaaaatccagatgtagaattggccattgaaattattgac
actgcctttgaacaattcaccaagaaacactacaaaaaactaattcaaaagtttgatatt
acagagatacaactaaaggatgccattcatgtgattgagcatttaaatccaaaacctggt
ggatcttatgcaggaaataaccgcatagtggaacatgtggtacccgattttgcgattcgt
attgtggacggcgaactcgagttaacacttaatggccgaaatgcgcctgaattacacgtt
tcgcgcgagtatagcaacatgatgaaaggctataaggaaagtaaggagaaatctaaatca
caaaaagatgccgttcagtttatcaaacaaaaattggatgcagccaaatggtttattgag
gctattaggcaacgtcagcaaacgttatttgttaccatgagttctattatgcattaccaa
aaagagtacttcttaacaggtgatgagcgcaaattacgcccaatgatcttaaaagatata
gctgacgaaattgaaatggatgtatcaaccgtttcgcgtgtagcaaacagtaaatatgtg
gatacaccgtatggaacaaagttgattaaggaattcttttcggagtccatgaccaacgat
caaggtgaagaagtatcaacccgagaaattaaaaaaatattagagacggttatcgaagat
gaaaacaaacgaaaacccatgacagacgacgctttagccaaaatactcaaagaaaaaggc
tatcctattgccagacgaaccgttgctaaataccgtgaacaattagacattcctgtggct
aggttacgaaagaaaatctaa
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