Bizionia sp. M204: GMA17_14770
Help
Entry
GMA17_14770 CDS
T08096
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bia
Bizionia sp. M204
Pathway
bia03030
DNA replication
bia03410
Base excision repair
bia03420
Nucleotide excision repair
bia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMA17_14770 (polA)
03410 Base excision repair
GMA17_14770 (polA)
03420 Nucleotide excision repair
GMA17_14770 (polA)
03440 Homologous recombination
GMA17_14770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bia03032
]
GMA17_14770 (polA)
03400 DNA repair and recombination proteins [BR:
bia03400
]
GMA17_14770 (polA)
Enzymes [BR:
bia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMA17_14770 (polA)
DNA replication proteins [BR:
bia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GMA17_14770 (polA)
DNA repair and recombination proteins [BR:
bia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GMA17_14770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GMA17_14770 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH
Motif
Other DBs
NCBI-ProteinID:
UPS92909
LinkDB
All DBs
Position
complement(3242443..3245295)
Genome browser
AA seq
950 aa
AA seq
DB search
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGTDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVEMYEEYKANRDETPEGIKVAVPYILEILKAMHIPIMVKEGFEADDVIGT
LSKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPKSFGGGYEVWGIPEVQKKFDVERPEQ
VIDFLGMMGDASDNIPGLPGVGEKTAKKFIKAYGSMEGLFANTHELKGRMKEKVEASKEL
GLLSKKLATIMLDVPVEFNAKDFELDHPDIAKVTEIFQELEFRRLIDNFLKTFAVQPEET
ASDTTAKTTDTKATPKETASAGAGQFSLFGGNPSSASEAEITNDFTRKTADTTSHFYQSI
APGMAIKLFIKNLMNQTSVCFDTETTGLNPLTAELVGIAFSWEVGKGFYLPFSENKEEAQ
ELLEALRPFFENEAIEKVGQNLKYDIKVLAKYNITVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYSPISIETLIGKKGKNQKSMRDVPLEIQTEYAVEDADITLQLKELFTNELGEA
NTQKLFDDIEIPLLRVLAAMELEGINLDTEFLNSLSNQLNSDIADLEQKIYKEAGEEFNI
ASPKQLGDILFDKMKLVAKPKKTKTGQYATGEEILSYLAKDHEIIQSILDFRGLSKLKST
YVDALPLQVEPSTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRNED
YTLLAADYSQIELRIIAALSEEETMIEAFKNGEDIHASTASKVFNVPLSEVTREQRSNAK
TVNFGIIYGVSAFGLSNQTDLNRNEAKELIDTYYETYPKLKRYIGTQVDFARDNGYVQTV
LGRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLNSNNYKTKMLL
QVHDELVFDVYKPELEAIKTLVKTEMESAFNLSVPLDVDMDTGDNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaaaaacgtctttttctagttgatgcttacgcccttattttccgcggctat
tatgcatttataaaaaatccacgaatcaattccaaaggtacagatacctctgctattatg
ggttttatgaattcccttttagatgttataaaacgtgagcgaccagaccatttggcggtt
tgttttgataaaggcggtagcgcagatcgtgtggaaatgtacgaggaatacaaagccaat
cgggatgaaactccagaaggcattaaagtggcagttccgtatatattggaaattttgaaa
gccatgcatattcctattatggtaaaggaaggttttgaagctgatgatgttattggaaca
ctttccaaacaagctgaaaaagaaggttatcaaacttttatggtgacgccggataaagat
ttcgcccaattagtttcggaaaatatatttatgtaccgcccaaaatcgtttggtggtggc
tatgaagtttggggaatacctgaagttcagaaaaagtttgacgtggaacgtcctgaacaa
gtaatcgattttctagggatgatgggtgatgcatctgataatattccgggattaccaggc
gttggcgaaaaaacggctaaaaaattcatcaaagcatatggcagtatggaaggtcttttt
gcgaatacccacgagcttaaaggcagaatgaaggaaaaggtagaagcatcaaaagaatta
ggtttgctatctaaaaagttagcaaccattatgctggatgttcctgtagaatttaatgcg
aaagattttgaattagaccaccctgatattgccaaagttaccgagatttttcaagaatta
gaattcagacgattaattgataatttcttaaaaacatttgcggttcaaccagaggaaaca
gcctcagatacaactgcaaaaacaaccgacactaaagcgacgcccaaagaaacagcttcg
gcaggtgctggacaattttcattgtttggtggtaatccatcaagtgcttcagaagccgaa
attacaaacgatttcactagaaaaacagccgataccacatcgcatttctatcaaagtatt
gcgcctggcatggctataaaactgtttatcaaaaacttaatgaatcagacatcggtttgt
tttgataccgaaaccactggtctcaatccgctaacagctgaattggttggaattgcattt
tcatgggaagttggtaaaggtttttatttaccgttttcagaaaacaaggaagaggcacaa
gaattacttgaagctctgcgtccatttttcgagaatgaagctattgaaaaagtcggtcag
aatttaaagtatgatattaaggtacttgctaaatacaacattaccgtaaaaggtaaattg
tttgataccatgttggctcattatctgataaatcctgatatgcgccataatatggatgtg
cttgctgaaacctatttgaattattcgcctatttccatagaaacactcattggaaagaag
ggcaagaatcagaaaagcatgcgcgatgtgcctttagaaattcaaacggaatatgcggtt
gaagatgctgatattaccttgcagttaaaagaacttttcactaacgaactcggtgaagcc
aatactcaaaaattattcgatgacattgaaattccattgctccgcgttttagctgctatg
gaattagaaggcattaatttagataccgaatttttgaattccctttccaatcagttgaat
tcagacattgccgatttggaacaaaaaatctataaagaagctggtgaagaattcaatatt
gcctcaccaaaacaattaggcgatattttatttgataaaatgaaattggttgcaaaacct
aaaaaaaccaaaacaggtcaatatgctactggcgaagaaatattaagctacttagcaaaa
gaccatgaaattattcagagtattttagatttcagaggcctttcaaaattaaaaagcacc
tatgtagatgcgttgccactacaggtagaaccttcaacaggacgcgtgcatacggattat
atgcaaaccgttgctgccactggacgtttgagtagtaacaatccgaatttacagaatatt
cccatccgtaccgaacgtggaaggcaagtacgaaaagccttcgtacctagaaatgaggac
tacaccttattagctgccgattatagccaaattgaattacgcattattgctgctttaagc
gaagaagaaaccatgattgaagcctttaaaaatggcgaagatattcatgcgtctaccgct
tctaaagtttttaatgtacctctttctgaagtcacgcgcgaacaacgaagcaacgccaaa
acggttaattttggaataatctatggtgtatccgcttttggattgagcaatcaaacggat
ttaaaccgcaacgaagccaaagaactgattgatacctattatgaaacctacccaaaactg
aaacgctatattggaacacaagttgattttgcgcgcgataacggttatgtacaaaccgtt
ttaggaagacgccgatatctaaaagatattaattctagaaacgccgtggttcgcggagct
gcagaacggaatgcggtaaacgcaccaatccaaggatctgcagcggatattattaaaata
gccatgattaatatttacaacaaactaaatagcaataattataaaaccaaaatgctctta
caggtacatgatgaattggtttttgatgtgtacaaacccgaattagaagccattaaaacg
ttggtaaagaccgaaatggaaagtgcttttaatttatccgttccattggatgtggatatg
gatactggcgataattggttggaggcgcattaa
DBGET
integrated database retrieval system
