Bradyrhizobium icense: LMTR13_00345
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Entry
LMTR13_00345 CDS
T04485
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LMTR13_00345
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bic01007
]
LMTR13_00345
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bic03016
]
LMTR13_00345
Enzymes [BR:
bic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LMTR13_00345
Amino acid related enzymes [BR:
bic01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LMTR13_00345
Transfer RNA biogenesis [BR:
bic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LMTR13_00345
Prokaryotic type
LMTR13_00345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ANV98860
UniProt:
A0A1B1U804
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All DBs
Position
complement(62564..64972)
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AA seq
802 aa
AA seq
DB search
MKFTLSWLKEHLDTDEPLEKLADKLTMIGLEVESIEDKGKALAPFSIARVISAEQHPNAD
RLRVCMVDTGDGAAPVQVVCGAPNARAGLVSVFSPPGTFIPGKNITLGVGTIRGVESRGM
LCSAAELQLSEDHDGIMELPADAPIGKGYAEWAGLGDPVLEINLTPNRQDCTGVHGIARD
LSAADMGKFIDPGIKPVKGEFPCPVKLTVEDATLCPGFALRLVRGVKNGPSPDWLQKRLT
SIGLRPINALVDITNFMTYDRARPLHVFDARKVTGNLTVRRAKEGESLLALDGRTYTLDP
SICVISDEHGVESLAGIMGGETSGCDENTSDVLIESALWNEINIAQTGRKLGINSDARYR
FERGVDPAFMVPGIELATKMAMELCGGTPSETVVVGNAFGDDRIIDFPLSEVKRLAGIEV
PLVEMRRILGHLGFMVAGSGPVVKVAVPSWRTDVHGKADIVEEVVRIVGVDKVPMTAFER
GDDARKSVLTTIQNRTRRAKRALAARGMVEAVTWSFISKPHAELFGGGQAELVLANPIAS
DMSDMRPSLLPGLVAAAQANANRGYSDVALFEVGQIFKGDKPDNQFVAASGVRHGFASSN
GMGRHWSGSAIADALDAKADAFAVLAAAGAPMQALQIVPGGPAWLHPGRSGTIQIGPQNV
LGYFGELHPRALEALGADGPMIAFEVILDRIPDAKKKPTRAKPLLELSAFQPVSRDFAFI
VDRTVKAGDIVRAAQGADKKLITDVAVFDVYEGKGIDPAKKSIAIAVTIQPREKTLTDQE
IDAVAAKLVAEVTKKTGGTLRG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacgctctcctggctgaaggaacatctcgacaccgacgagccgctggaaaag
cttgccgacaagctcaccatgatcgggctcgaggtcgagagcatcgaggacaagggcaag
gcgcttgcgccattctccatcgcgcgggtgatctcggccgagcagcatcccaatgccgat
cgtctgcgggtctgcatggtcgacaccggcgatggtgctgcgccggtgcaggtggtttgc
ggcgcgccgaatgcgcgcgctgggctcgtcagcgtgttctcgccgcccggtacgttcatc
ccgggcaagaacatcacgctcggcgtcggcacgatccggggcgtcgagagccgcggcatg
ctgtgctcggcggccgaactgcagctttccgaggaccatgacggcatcatggaattgccg
gccgacgccccgatcggcaagggctatgccgaatgggcaggcctcggcgatcccgtgctc
gaaatcaacctgacgccgaatcgccaggattgcaccggcgtacacggcatcgcgcgcgac
ctctccgccgccgatatgggcaagttcatcgaccccggcatcaagccggtcaagggcgaa
ttcccctgtccggtgaaactgacggtggaagatgccacgctgtgcccgggcttcgcgctg
cggctggtgcgcggcgtcaagaacggtccctctccggactggctgcagaagcggctgacc
tcgatcgggctgcggccgatcaatgcgctggtcgacatcaccaacttcatgacctatgac
cgcgcccggccgctgcatgtgttcgacgccaggaaggtgacgggcaatctcaccgtacgc
cgcgccaaagaaggcgaaagcctgctggcgctcgacggccgcacctacacgctcgatccc
tcgatctgcgtgatatccgacgagcacggcgtcgaatcgctcgccggcatcatgggcggc
gagacctccggctgcgacgagaatacatcagacgtgctgatcgaatcggcgctgtggaat
gagatcaacatcgcgcagaccgggcgcaagctcggcatcaattcggacgcgcgctaccgc
ttcgagcgcggcgtcgatccggccttcatggtgcccgggatcgagcttgcgaccaaaatg
gcgatggagctctgcggcggtacgccgtcggagaccgtggtcgtcggcaatgcgttcggc
gacgatcgcatcatcgatttcccgctgagcgaggtcaaacgtctggcgggaatcgaggtg
ccgctggtcgagatgcggcgcatcctcggccatctcggcttcatggtcgccggcagcggc
ccggtggtgaaggtcgcggttccctcctggcgcaccgacgtgcacggcaaggccgacatc
gtcgaggaagtcgtgcgtatcgtcggcgtcgacaaggtgccgatgacggcgttcgagcgc
ggcgacgacgcccgaaaatcagtcctgactacaatccagaaccgcacccgtcgcgccaaa
cgcgcactggcagcgcgcggcatggtggaggccgtgacgtggtcgttcatctccaaaccg
catgccgagttgttcggcggcggccaggccgagctcgtgctcgcaaacccgatcgcgtcc
gacatgtccgacatgcggccgagcctgctgccgggcctcgtcgccgcggcgcaggccaac
gccaaccgcggctactccgacgtcgcgctgttcgaggtcggacagatcttcaagggcgac
aagccggacaaccagttcgtcgcagcctcaggcgtacgccacggctttgcgtcctcaaac
ggcatgggccggcactggtccggctcggccatagcagatgcgctcgacgccaaggccgat
gcgttcgccgtgctggctgctgccggagcgccgatgcaggcgttgcagatcgttcccggt
ggtcccgcgtggctgcatcccggccgttccggcacgatccagatcggcccgcagaacgtg
ctcggctatttcggcgaactgcatccgcgcgcgctggaagcgctcggcgccgatggcccg
atgatcgcattcgaagtcatcctcgaccgcattcccgatgccaagaagaagccgacccgc
gccaagccgctgctcgaactctccgcgttccagccggtgtcgcgcgattttgccttcatc
gtcgatcgcaccgtgaaggccggcgatatcgtgcgcgctgcgcaaggcgcagacaagaag
ctgatcaccgatgtagccgtattcgacgtctatgaaggcaagggcatcgatccggccaag
aagtcgattgcgatcgccgtgacgattcagccgcgcgagaagacgctgacggatcaggag
atcgatgcagtggcggcgaagctcgtggccgaggtgacgaagaagaccggcggaaccttg
cggggatga
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