Bradyrhizobium icense: LMTR13_00550
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Entry
LMTR13_00550 CDS
T04485
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bic
Bradyrhizobium icense
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bic03032
]
LMTR13_00550
03036 Chromosome and associated proteins [BR:
bic03036
]
LMTR13_00550
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_00550
DNA replication proteins [BR:
bic03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMTR13_00550
Chromosome and associated proteins [BR:
bic03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LMTR13_00550
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LMTR13_00550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ANV98895
UniProt:
A0A1B1U876
LinkDB
All DBs
Position
99810..100115
Genome browser
AA seq
101 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKSVPFFKTGKEMRERLNRDNGSPEAGA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaacttgttcagcgcatcgccgagcacaacccgcacctctatcagcgg
gatgtggagaacattgtgaacgcgatcctcgatgagatcgtcgcagcgctagcgcgcggc
gaccgtgtcgagctgcgtggcttcggcgccttttcggtcaagcatcgcccggcacgggcg
gggcgcaatccgcgcaccggcgcccatgtgccggtcgaccagaagagcgtcccgttcttc
aagacgggcaaagaaatgcgcgagcggctgaaccgcgacaacggctcgcccgaggccggc
gcgtaa
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