Bradyrhizobium icense: LMTR13_00630
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Entry
LMTR13_00630 CDS
T04485
Name
(GenBank) hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00300
Lysine biosynthesis
bic00470
D-Amino acid metabolism
bic01100
Metabolic pathways
bic01110
Biosynthesis of secondary metabolites
bic01120
Microbial metabolism in diverse environments
bic01230
Biosynthesis of amino acids
Module
bic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMTR13_00630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMTR13_00630
Enzymes [BR:
bic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LMTR13_00630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANV98910
UniProt:
A0A1B1U860
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All DBs
Position
119088..120488
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AA seq
466 aa
AA seq
DB search
MRASQSKTYSPPTITGELGRGDAVVARNSHNRNVLPFCDQIDGVKIDDLVNRFGSPLFVF
SERTVIETARRAKKAFNDVYPNTTFGWSYKTNYLKAICNIFHKEGWIAEIVSDFEYQKAE
HAGVPGRDIIYNGPCKSRESLEHALRQGSLVQIDNWDELRAIEEIASTMHRPVDVGVRIW
MDTGLTPAWSKFGFALANGEAARAVLRVISNPHLNLHTLHSHIGTYVLEPKAYAVAAERL
VTLREMVFRKTGHLVPCINLGGGFPSSSLLHEMPENTKAPPIEEYAEAIAGVLNALPRVR
RPQLRLETGRHLIDDAGYLIASVVAVKGAERDKAKPSSGKQTRGGYIVDAGVNLLYTSTW
FKVGVMPTTPSDPLLTNAVKLYGCLCMNIDVIRQEVELPPLEVNDKLVLHPVGAYNLTQS
MQFIGLRPAVVLIGLDGSVNVIRRRETLIDVESGEQVPTHLQLKAT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcctcgcaatcaaaaacgtattcgccaccgaccataacgggggagttgggtcgc
ggtgacgccgtcgtcgcccgcaactctcacaatcggaacgtgctgccgttttgtgatcaa
atcgacggggtcaagattgacgaccttgtcaaccgcttcggctcgcctcttttcgtcttc
tccgaacgcacggtgattgagacggcgcggcgcgctaaaaaagccttcaacgacgtgtat
ccgaatacgacgtttggttggtcttacaagaccaactacctcaaagcgatctgcaacatc
ttccacaaagaggggtggatcgccgaaatcgtttctgattttgagtatcagaaggccgaa
cacgctggcgttccgggtagggacattatctataatggtccctgcaagtcgcgtgagagc
cttgaacacgccctgcgtcaaggctccctggttcaaattgacaattgggacgagcttcga
gcgatcgaagaaattgcgtctacaatgcatcgccccgtcgatgttggcgtccgtatttgg
atggacaccggtttgactccggcttggtccaagtttggatttgcattggccaacggcgag
gcggcacgggctgtgttgcgtgttatctcaaatccacatttgaatctgcacactctgcac
agccacatcggtacctatgttctggaaccgaaagcctatgccgttgcggcagagcgactt
gttaccttgcgagagatggtctttcgcaagaccggccatcttgtgccttgcattaatctc
ggtggcggttttccttccagcagcttgctgcacgaaatgcccgagaacactaaggcgcct
ccgattgaagaatatgctgaggcgattgcgggcgtcctgaatgcgctccctcgcgtacga
cgcccacaattgcgactcgaaaccggtcgccaccttatcgatgacgcaggctacttgatt
gcttccgttgtcgccgtcaaaggagccgaacgcgataaggctaagcccagttcaggaaag
cagactcgcggcggctatatcgtcgatgccggggtgaaccttctctacacttcgacgtgg
tttaaagtcggcgtgatgcccactacgccgagtgatccgctgctcaccaacgccgtcaaa
ctctatggctgtctgtgtatgaacatagatgtaattcggcaagaggtcgagcttccgccg
cttgaggtcaatgacaagttggtgctccatccggttggagcttataacttaactcagtca
atgcagttcattggcttgcgacccgcggtagttcttatcggccttgatggttccgttaat
gtgatccgtcgccgtgagacgctaattgatgtcgaaagtggggagcaagttcccacgcat
ctccaactcaaagcaacgtag
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