Bradyrhizobium icense: LMTR13_02450
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Entry
LMTR13_02450 CDS
T04485
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03030
DNA replication
bic03410
Base excision repair
bic03420
Nucleotide excision repair
bic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMTR13_02450
03410 Base excision repair
LMTR13_02450
03420 Nucleotide excision repair
LMTR13_02450
03440 Homologous recombination
LMTR13_02450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bic03032
]
LMTR13_02450
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_02450
Enzymes [BR:
bic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMTR13_02450
DNA replication proteins [BR:
bic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LMTR13_02450
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LMTR13_02450
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMTR13_02450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANV99209
UniProt:
A0A1B1U8V6
LinkDB
All DBs
Position
complement(507077..510133)
Genome browser
AA seq
1018 aa
AA seq
DB search
MPKSAPKAAAKPAPATKAPAKAPAKAPAKGDHVFLVDGSSYIFRAYHALPPLNRKSDGLQ
VNAVLGFCNMLWKLLREMPEDNRPTHLAIVFDKSEITFRNKLYPDYKAHRPPAPDDLIPQ
FALIREAVRAFDLPCLEQVGYEADDLIATYVRIACERGATATIVSSDKDLMQLVTDCVTM
YDTMKDRRLGVAEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGVKTAAQLIVEYGDL
ETLLQRAGEIKQPKRREALIENAEKARISRQLVLLDDKVDLEVPLDDLAVHEPDARKLIA
FLKAMEFSTLTRRVAEYSQIDPADIEPDAGNKSGASVFAVPPSGKKPEGYEGATLFDSPP
TGKAGAAPGKTGGDKQDKAASHKGTPISLATARAEAARKLPVDRNKYQTIRTFDELNAWV
ARAYDAGTFAIDAKASSDDPMQADICGIALALAPNDACYIPLTHKQSGGGAGLFDAGLAP
DQITAAEALAGLQPLLESQGILKIGFDIKFNAVILAQHGITLCNVDDAQLMSYALDAGRN
SHALGSLAERWFGHAVTSESELIGNGKNKLTFDQVAIDKASAYSAESADMILRLHRVLKP
RLAAEHMTTVYETLERPLVTVLARMERRGISIDRQVLSRLSGDFAQTAARVEAELQEIAG
EPINVGSPKQIGDIIFGKMGIPGGTKTKTGAWSTSAQILDELAEQGHEFPKKILEWRQVS
KLKSTYTDALPNYVHPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFI
ATPGHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPIKDMPGEVR
RRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFCRTNGY
VLTLFGRKCHYPDIKASNASIRSFNERAAINARLQGTAADIIRRAMIRMEDALAEKKLSA
QMLLQVHDELIFEVPDDEVAATLPVVQHVMQDAPFPAVALSVPLQVDARAANNWDEAH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcagcccccaaagccgccgcgaaacccgctcccgccaccaaggcccctgcc
aaggcgcccgccaaagcccccgccaagggcgaccacgtgttcctggtcgacggttcctcc
tacattttccgcgcctatcacgcgctgccgccgttgaaccgcaaatccgacgggctgcag
gtcaacgccgtgctcggcttctgcaacatgctgtggaagctgctccgcgaaatgcccgag
gataaccggccgacgcatctggcgatcgtgttcgacaagtcggaaatcacgttccgcaac
aagctttatcccgattacaaggcgcatcggccgccggcacccgacgacctgatcccgcag
ttcgcgttgatccgcgaggcggtgcgcgcgttcgacctgccctgcctcgagcaagtcggc
tacgaagccgacgatctgatcgcgacctatgtgcggatcgcctgcgagcgcggtgctacc
gccaccatcgtgtcctcggacaaggacttgatgcagctcgtgaccgactgcgtcaccatg
tacgacaccatgaaggaccggcgcctcggggtcgccgaggtgatcgagaaattcggcgtg
ccgccggagaaggtggtcgaggtgcaggctttggccggcgattccaccgacaatgtgccg
ggcgtgcccggtatcggcgtcaagaccgcggcgcaactgatcgtcgaatatggcgatctt
gaaacgctgctgcagcgcgccggcgagatcaagcagccgaagcggcgcgaggccctgatc
gagaacgccgagaaggcgcggatctcgcggcaactggtgctgctcgacgacaaggtcgat
ctcgaagtgccgctcgacgacctcgccgtgcacgagccggatgcgcgcaagctgatcgcc
ttcctcaaggcgatggagttttccaccctcacccgccgtgtcgccgaatactcacagatc
gatccggccgatatcgagccggacgccggcaacaagagcggcgccagcgttttcgcggtg
ccgccctcgggcaagaagccggaaggctacgaaggcgcgacgctgttcgatagcccgccc
acaggcaaagctggcgctgcaccgggcaagaccggcggcgacaagcaggacaaggccgcg
agccacaagggcacgccgatctcgctcgccaccgcacgcgccgaagccgcgcgaaagttg
ccggtcgaccgcaacaagtaccagaccatccgcacgttcgatgagctcaacgcctgggtt
gcgcgggcctatgacgccggcacgtttgcgatcgacgccaaggcgagttctgacgatccg
atgcaggccgatatctgcggcatcgcgctggcgctggcgccaaacgacgcctgctatatt
ccactcacgcacaagcaatccggcggcggcgcaggcctgttcgacgctggcctcgcgccg
gaccagatcacggccgccgaggcgctggcggggttgcagccgctgctggaatcacagggc
attctcaagatcggcttcgacatcaagttcaacgccgtgattctggcgcagcacggcatc
acgctgtgcaacgtcgacgacgcgcaattgatgtcgtatgcgctcgacgccgggcgcaat
tcacatgcgctgggatcactcgccgaacgttggtttggccatgccgtcacgagcgaaagc
gagctgatcggcaacggcaagaacaagctgaccttcgaccaggtcgcgatcgacaaggca
tctgcttattcagccgaaagcgccgatatgatcctgcggctgcatcgcgtgctcaagccg
cgcctcgccgcggagcacatgacgaccgtctatgagaccctggagcggccgctggtcacc
gtgctggcgcggatggagcggcgcggcatctcgatcgatcggcaagtgctgtcgcggcta
tccggcgatttcgcccagaccgcggcgcgcgtcgaggccgagttgcaggagatcgccggc
gagccgatcaatgtcggcagccccaagcagatcggcgacatcatcttcggcaagatgggc
atacccggcggcaccaagaccaagaccggcgcgtggtcgacctcggcgcagattctcgac
gaactcgccgaacagggccacgaatttccgaagaagattctggagtggcggcaggtctcg
aaactgaaatcgacctataccgacgcgctgccgaattacgtgcatccgcagacccatcgc
gtgcacacgacttacgcgctggccgcgaccaccacggggcgcttgtcgtcgaacgagccg
aacctgcagaacataccggttcgcaccgaggacggccgcaagatccgccgcgcctttatc
gcgacgcccggccacaagctggtgtcggcggattactcgcagatcgaattgcggctgctc
gccgagatcgccgacattcccgtgctgaagcaggcgttccgggacgggctcgacattcac
gcgatgacggcatccgaaatgttcggcgtgccaatcaaggacatgccgggcgaagtgcgg
cggcgtgcgaaggcgatcaatttcggcatcatctacggcatctccgcattcgggctcgcc
aaccagctcggcatcgcccgcgaggaagcctccgcctacatcaagaaatatttcgagcgc
ttcccgggcatccgcgcctacatggacgagacacgggatttctgccgcaccaacggctac
gtgctgaccctgttcggccggaagtgtcactaccccgacatcaaggcctccaacgcctcg
atccgctccttcaacgagcgcgccgcgatcaacgcgcgcctgcagggcaccgccgccgac
atcatccgccgcgccatgatccggatggaagatgcgctggcggagaagaagctgtcggcg
cagatgctgttgcaggtgcatgacgagctgatcttcgaggtgcccgacgacgaagtggcg
gcgacgctgccggtggtgcagcacgtgatgcaggacgcgccgttcccggcggtggcgctg
tcggtgccgctgcaggtcgatgcgcgggcggcgaataattgggacgaggcgcattga
DBGET
integrated database retrieval system
