Bradyrhizobium icense: LMTR13_05115
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Entry
LMTR13_05115 CDS
T04485
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03030
DNA replication
bic03430
Mismatch repair
bic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMTR13_05115
03430 Mismatch repair
LMTR13_05115
03440 Homologous recombination
LMTR13_05115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bic03032
]
LMTR13_05115
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_05115
Enzymes [BR:
bic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMTR13_05115
DNA replication proteins [BR:
bic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMTR13_05115
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMTR13_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
PAS
PAS_4
PAS_8
Rv2175c_wHTH
HisKA
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ANV99643
UniProt:
A0A1B1UA58
LinkDB
All DBs
Position
1061687..1063792
Genome browser
AA seq
701 aa
AA seq
DB search
MQAAVAIPILLAALALAAFAVSGVALWQAVQLGGAVGVYMSIAFAVVAALVALAWALLHV
KLLKPLAALKRELLMQSQIRVDRPLAVDRGHLLNGLPTAVDKILGTLRAARGETQEAVDA
ATRRAEEQKSRLEAILLDLSEGVIVCNLEHRILLYNQAAARILNARDTLGLARSLFGVLT
REPVLLTLELLLQRSEDAAGDEARSTAESTLDSTTRRFVCASVDLATLLQARLSLVREPS
GRASGYVLTFADVGAELENVAQRDALLREVAMEWRRPLASLRAAAEMLAGELEAGERRVF
QDIVGKEIGTLDRSFADVAQRYERLATGQWPLADIYSLDLFRAVRRHLADADGIQVTPVG
VPVWIHADSHSLVLALEHLIRAVARHTAKAAFDIGAVVRGEYVYVEVVWDGAPLASAIIE
AWLAEPLKGTIGNRTVHQIVERHGSELWSQALPEGRTCLRLPLRKTEQPRVPERLDRVAP
MPELYDFDLFAPSTEAIRDTPLHKLNLVVFDTETTGLRPNEGDELISVGAVRVVNGRILT
GETFERLINPSRVIPASTTRIHGITTEMVRDKPPAHVILPQFKSFIGDSVLVAYNAAFDM
KFLENGAEQAGVKFDNPVLDALLLSMYLQPDVSDFSLTATAERLGVEVIRRHTAIGDAMT
TAAIFVKLLDLLKARGIETLGQAARISSRMMEQRRQQAQLT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgccgttgcgataccaatcctcctcgcagcattggcgctcgccgccttcgct
gtgtccggcgttgcgctgtggcaggcggtgcaacttggcggagcggtcggcgtttacatg
tccatcgcatttgccgtcgtcgccgctttggtggcgctggcttgggctctgctgcatgtc
aagctcctcaagcccttggccgctctgaagcgggaactgctgatgcagtcgcagatacgc
gtcgatcgaccgctcgcggtcgatcgcggccacttgctcaatgggctcccgacggcggtc
gacaaaatactcggcacgctccgagctgcgcgtggcgagacacaggaggccgttgatgct
gccacgcggcgagcggaggaacagaagagccggctcgaggccatcctgctcgatctctcc
gaaggtgtgatcgtctgcaatctcgagcaccgcatactcctctacaaccaggctgccgcc
cggatactcaacgcgcgcgacacgcttgggcttgcccgctcattgtttggcgtgctgacg
cgagagcccgtgctattgacgcttgagctgctcctgcaacggtcagaggacgcagccggc
gatgaagcccggtccaccgcagaatcgacgctcgattccacgacgcgccgcttcgtctgt
gcgtcggtcgaccttgctactttgctgcaggcgaggctcagcctggtgcgcgaaccttcg
ggccgcgcctcaggctacgtgttgacctttgccgatgtcggcgccgaactcgagaacgtg
gcccagcgcgatgcgctcttgcgtgaggtcgccatggaatggcgacggccacttgcaagc
ttgcgcgccgccgccgaaatgctggcgggagagctcgaagcgggcgagcgccgcgtcttt
caggacatcgttggcaaggagatcggaaccctcgatcggagctttgccgacgttgcgcag
cgttacgaacgccttgcgacgggtcagtggccgttggccgacatttactcgctggatctg
ttccgcgccgtccgcaggcatttggccgacgccgacggcatccaggtcacccccgtgggc
gtgccggtctggattcatgccgacagccactcgctggtgcttgcgctcgagcatctcatc
cgcgccgttgccaggcacacggcgaaagccgccttcgatatcggcgccgtggtgcgaggc
gagtacgtctacgtcgaggtggtttgggacggcgcaccgctcgcctcggcgattatcgaa
gcctggctggcggagccgctgaagggcacgatcggcaaccgcacggtccaccagatcgtg
gagcgacatggcagcgagctatggagccaggcgctgccagaggggcgcacgtgcctcaga
ttgccgctaaggaagaccgagcagccacgcgtcccggaacggttggaccgcgttgcgccg
atgccggagctatatgacttcgacttgtttgctccttcgactgaggcaatcagggacacg
ccgttgcacaagctcaacctggtcgtcttcgacaccgagaccaccggcctcaggcccaac
gagggcgatgagctcatctcagtcggcgcggttcgtgtggtcaatggtcgcatcctgacg
ggcgagaccttcgagcggctgatcaatccgagccgcgttatcccggccagcaccacgcga
attcacggcatcaccaccgaaatggtgcgcgacaagccccctgcccatgtcatcttgcca
cagttcaagtccttcatcggtgactccgtgctcgtcgcctacaacgccgcgttcgacatg
aaattccttgagaacggagccgagcaggcaggcgtcaaattcgacaacccggtgctcgat
gccctgcttctgtccatgtatctgcagccggatgtgtccgatttttcgctgaccgccact
gccgaacgactgggtgtcgaggtcattcgcaggcacaccgcaatcggcgacgccatgacc
acggccgcgatcttcgtgaagctcctggatctgttgaaagcccgcgggatcgagacgctc
ggtcaagccgccaggatctcaagccggatgatggagcagcgtcgtcagcaggcacaactt
acatga
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