Bradyrhizobium icense: LMTR13_10870
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Entry
LMTR13_10870 CDS
T04485
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00061
Fatty acid biosynthesis
bic00071
Fatty acid degradation
bic01100
Metabolic pathways
bic01212
Fatty acid metabolism
bic02024
Quorum sensing
bic04146
Peroxisome
Module
bic_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LMTR13_10870
00071 Fatty acid degradation
LMTR13_10870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LMTR13_10870
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMTR13_10870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bic01004
]
LMTR13_10870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bic04147
]
LMTR13_10870
Enzymes [BR:
bic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LMTR13_10870
Lipid biosynthesis proteins [BR:
bic01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LMTR13_10870
Exosome [BR:
bic04147
]
Exosomal proteins
Exosomal proteins of breast milk
LMTR13_10870
Exosomal proteins of breast cancer cells
LMTR13_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
SH3_9
Motif
Other DBs
NCBI-ProteinID:
ANW00594
UniProt:
A0A1B1UCW3
LinkDB
All DBs
Position
complement(2311914..2313845)
Genome browser
AA seq
643 aa
AA seq
DB search
MMDYAGRVAQADTFPKLLRLNAKEHGGEIALREKDLGLWRVFTWSNYQTRVHDFALGLIE
LGLGRGDVIGIIGDNRPDWVAAEIATHAIGAMSLGLYRDVLDEEAAYLLSYGEAKLVFAE
DEEQVDKLLALADRAPNLKHIVYSDPRGMRKYDDPRLMEAEKLATMGRDRAAREPVLYDG
LVDATRGEDVAILCTTSGTTANPKLAMLAAGRVLKHCATYLAFDPKGPDDEYVSVLPLPW
IMEQVYALGKGLLCRMKVNFVEEPETMMHDFREIAPTFVLFAPRLWESIAADVRAGVMDS
SPLKQKLFDIGMKAGLSALAQGKHSMFADQLLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFQAMGVPLRTLYGQTELLGAYTLHPAGKVDPDTTGVPMAADIEIRVDHPDVNGVGEIV
VRHPNMFLGYYKNPEASAADIKDGWMHSGDAGYFNDQGQLVVIDRIKDLAETSRGERFSP
QYLENKLKFSPYIAETVVLGAGRDALAAMICIRYSIISKWAEKKRISFTTYTDLSSRPEV
YELLRKEVEGVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYADIIDAI
YGGRSDIPVDTVIRFQDGTTQRIRTTLRVVDLGGPAPMAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattacgccggacgcgtcgcccaggccgatacctttccaaagctgctgcgcctc
aatgcgaaagagcatggcggcgagatagcgttacgcgaaaaggatctcgggctgtggcgc
gtcttcacctggagcaactaccagacccgcgtccatgatttcgcgctcggcttgatcgaa
ctgggtcttgggcgcggcgacgtcatcggcatcatcggcgacaatcgcccggactgggtg
gcggcggaaatcgccacgcatgcgatcggcgccatgagcctcggcctctatcgcgacgtg
ctggacgaggaagcagcctacctgctcagctacggcgaggccaagctggtgttcgccgag
gatgaagaacaggtcgacaagctgctggcgctggccgatcgcgcgccgaacctcaagcac
atcgtctattccgatccacgcggcatgcggaagtacgacgatccgcgcctgatggaagcc
gagaagctggccacgatggggcgcgaccgcgccgcgcgcgagccggtcctttacgacggg
ctggtcgatgcgacgcgcggcgaagacgtcgcgatcctctgcaccacgtccggcaccacg
gccaatcccaagctcgcgatgctggcggctgggcgggtcctgaagcattgtgcgacctat
ctcgccttcgatccgaagggaccggacgacgaatatgtctcggtgctgccgctgccctgg
atcatggaacaggtctacgcgctcggcaaagggctgctgtgccggatgaaggtcaacttc
gtcgaagagcccgagaccatgatgcacgatttccgcgagatcgcgccgaccttcgtgctg
ttcgcgccgcggctctgggaatcgatcgccgccgatgtacgcgccggcgtgatggactcc
tcgccgctcaagcaaaaactgttcgacatcggcatgaaggcggggctttcggcgctggcg
cagggcaagcattcgatgtttgccgaccagttgctgttccgcgcgctgcgcgaccgcttg
ggcttcacccggctgcgctcggccgcgaccggcggcgccgcgctcggtcctgatacgttc
aagttcttccaggccatgggcgtgccgctgcgcacgctctatggccagaccgaactgctc
ggtgcctacacgctgcatcctgcgggcaaggtcgatccggatacgaccggcgtgccgatg
gccgccgacatcgagatccgcgtcgaccaccccgacgtcaatggcgtcggcgagatcgtc
gtccgccatcccaacatgttcttaggctattacaagaatccggaagcctcggcggccgac
atcaaggacggctggatgcattccggcgacgccggctatttcaacgatcaaggtcagctc
gtcgtcatcgaccgcatcaaggacctcgccgagacctcgcgcggcgagcggttctcgccg
caatatctggaaaacaagctgaaattctcgccctacatcgccgagacggtggtgctcggc
gccggccgcgacgcgctggcggcgatgatctgtattcgttactcgatcatctcgaaatgg
gcggagaagaaacggatctcgttcaccacctacaccgacctctcctcgcgtcccgaggtc
tatgaactgttgcgcaaggaggtcgagggcgtcaatgccacgctgccgccggcgcagcgc
atctcccgcttcctgctgctctacaaggagctcgacgccgacgacggcgagctgacccgc
acccgaaaagtgcgccgcagcgttatcaacgagaaatacgccgatatcatcgacgcgatc
tatggcggcaggagcgacattcccgtcgataccgtgatccgcttccaggacggcaccacc
cagcgcatccgcaccacgctccgcgtggtcgatctcggcggccccgcgccgatggcggag
gccgcggaatga
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