Bradyrhizobium icense: LMTR13_11060
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Entry
LMTR13_11060 CDS
T04485
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMTR13_11060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_11060
Enzymes [BR:
bic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LMTR13_11060
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMTR13_11060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
ANW00627
UniProt:
A0A1B1UCY8
LinkDB
All DBs
Position
complement(2356008..2357396)
Genome browser
AA seq
462 aa
AA seq
DB search
MHHITLDSQTDFDGWRKAARTLALNDVKPSDVSWRVADDDDEPELFEPTAPPLEPPQGTF
NVPARFVELAEVAILHRNPERFALLYRLLWRLRTHHDLLELATDPDVAEITAMAKSVRRD
EHKMHVFVRFREIGREQKSHFVAWFEPEHHIVELAAPFFARRFADMPWSILTPDLCAHWD
GHVVSFTPGVSRSEAPSADRLDEIWRRDYASIFNPARLTVKTRNLQEGSMIKPAVKRAER
DATEPYQAPKRPEPPMVRRRVQDDIETLREEAADCRACPLYKNATQTVFGEGRQTARIML
VGEQPGDKEDLAGKPFVGPAGQMLDRALEEAGIDRRTVYVTNAVKHFKFVPRGKVRLHQK
PNTPEIKACRQWYERELAAIKPDLVVAMGATAAQSVFGKITPINKNRGHPIDLADGTRAL
VTVHPSYLLRLPDADAKAREYRRFVQDLKIAAGVLRKSAHAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacatcaccctcgacagccaaactgatttcgatggctggcgtaaagcggcccgc
acgctggcgctgaatgatgtgaaaccgtccgacgtgagctggcgcgtggctgatgatgat
gatgagcccgaactgttcgagccgaccgcgccaccgctcgaaccgccacagggcaccttc
aacgtaccggccagattcgttgaactggcggaggttgcgatcctgcatcgcaaccccgag
cgcttcgccctgctctatcgcctgctatggcggttgcgaacgcatcacgatctacttgaa
ctcgcgaccgatcctgacgtggctgaaatcaccgcgatggccaagtccgtgcgccgcgac
gagcacaagatgcatgtctttgtccgcttccgcgaaataggtcgcgaacagaaatcgcac
ttcgtcgcctggttcgagccggagcaccacatcgtcgaactggccgccccgttcttcgcg
cgccgtttcgccgacatgccctggtcgatcctgacgcctgatctctgcgcgcattgggac
ggccatgtcgtctcgttcacgccgggcgtcagcagaagcgaagcccccagcgcggaccgg
ctggacgaaatctggcggcgcgattacgccagcatcttcaatccagcacggctgactgtg
aagacgaggaacctgcaagagggttcaatgattaagcctgcagtcaagcgtgcggaacgc
gacgctacggaaccatatcaggcgccaaaacggccggagccgcccatggtgcgcagaaga
gttcaggacgacattgagacgctgcgcgaagaagccgccgattgccgcgcctgccctctt
tacaagaatgcgacgcaaaccgtgttcggcgaaggccggcaaaccgcgcggatcatgctg
gtcggcgagcagcctggcgacaaggaagatctcgccggaaagccgttcgtcggacccgcg
gggcaaatgctcgaccgcgcgctggaagaagccggcatcgaccgccgcacggtctacgtc
accaatgctgtgaagcatttcaagttcgtgccgcgcggaaaggtccgcctgcaccagaag
ccgaacacacctgagatcaaggcctgccggcagtggtacgagcgcgagctggccgcgatc
aaacccgacctggtggtggcgatgggcgcaaccgcagcgcaaagcgtgttcgggaaaatc
acgccgatcaacaagaaccgcggccacccgatcgatctcgccgatggcaccagggcgctg
gtcacggtgcacccgtcctatctgctgcgattgccggacgccgatgccaaggcgcgcgaa
taccggcgcttcgtccaggatctcaaaatcgccgccggcgtgctgcgaaaatcagcacat
gcggcctga
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