Bradyrhizobium icense: LMTR13_16865
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Entry
LMTR13_16865 CDS
T04485
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMTR13_16865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bic03021
]
LMTR13_16865
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_16865
Enzymes [BR:
bic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMTR13_16865
Transcription machinery [BR:
bic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMTR13_16865
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMTR13_16865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
ANW01594
UniProt:
A0A1B1UFR5
LinkDB
All DBs
Position
3603978..3604997
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVTPGGDATRFATVVAEPLERGFGQTLGNALRRILLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKSGPGVVTAGDIQ
TVGDIVVLNPDLQLCTLDEGAEIRMEFTVAAGKGYVAAERNRPEDAPIGLIPVDSLFSPV
RKVSYKVENTREGQILDYDKLTMTIETNGAISPEDAVAYAARILQDQLNVFVNFEEPRKE
VAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagaactcattcgaccgaacaagctgcaggtaacgccg
ggcggcgatgcgacccggtttgcgaccgtcgtcgccgagccgcttgagcgcggcttcggc
cagacgctcggcaacgcgctgcgccgcatcctgttgtcatcgctgcaaggcgccgccgtg
cagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcgggcgttcgcgag
gacgtcaccgacatcgtgctcaacatcaaggacatctcgatcaagatgcagggcgaaggc
cccaagcgcatggtcgtgaagaagtcgggtccgggcgtcgtcactgccggcgacatccag
accgtcggcgacatcgtcgtgctcaatcccgacctgcagctctgcacgctggacgagggc
gccgaaatccgcatggagttcacggttgccgccggcaagggctacgtcgccgccgagcgt
aaccggcccgaggacgcgccgatcggcctgatcccggtcgacagcctgttctcgcccgtg
cgcaaggtctcctacaaggtcgagaatacccgcgagggccagatcctcgactacgacaag
ctgaccatgacgatcgagaccaacggcgcaatctcgccggaggacgcggtggcctatgcg
gcgcgcatcctccaggatcagctcaacgtgttcgtgaacttcgaagagccgcgcaaggaa
gtcgcgcaggagatcatccccgatctcgccttcaacccggcgttcctcaagaaggtcgac
gaactcgaactgtcggtgcgttcggcaaactgcctgaagaacgacaacatcgtctacatt
ggcgacctcgtgcagaagtcggaagcggaaatgctccgtaccccgaacttcggccgcaag
tcgctgaacgaaatcaaggaagtgctggcccagatgggtctgcatctcggcatggaagtg
ccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgaggatcactactga
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