Bradyrhizobium icense: LMTR13_21520
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Entry
LMTR13_21520 CDS
T04485
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00550
Peptidoglycan biosynthesis
bic01100
Metabolic pathways
bic01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LMTR13_21520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LMTR13_21520
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bic01003
]
LMTR13_21520
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bic01011
]
LMTR13_21520
Enzymes [BR:
bic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LMTR13_21520
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LMTR13_21520
Glycosyltransferases [BR:
bic01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LMTR13_21520
Peptidoglycan biosynthesis and degradation proteins [BR:
bic01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LMTR13_21520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ANW02368
UniProt:
A0A1B1UHY8
LinkDB
All DBs
Position
complement(4561984..4564485)
Genome browser
AA seq
833 aa
AA seq
DB search
MRLLVRFLGFLFAAGTVVFLVGVAGVAGAIWHFSKDLPDYSQLQDYEPPVMTRVHASDGA
LLGEYSKERRLYLPIQAVPKLVINAFLAAEDKNFYEHGGIDFTGMARAAVLYAQNYGSNR
RPQGASTITQQVAKNFLLTNEVSFTRKIKEALLAMRIERAYSKDRILELYLNEIYLGLGA
YGIAAASLVYFDKSVNELTIAEASYLAALPKAPAALHPVRNRDRAVERRNYVIDRLVENG
WVKQADADKSRKEQLNVTSRGNGAHIFAGEYFAEEVRRDIFERYGEKKLYEGGLSVRATL
DPKMQVMARKTMVAGLVRYDEASGWRGAPSKLDISGDWGVKLADVKSLSDISPWRMAVVL
ETSDQSARIGFQPGRELGGAVSKQRQTGIITLDGVRWAKAASGPAKGRTPSSVAQVLSPG
DVIYADPLFDKEGKPVEGQYRLRQLPEVSGAMVAMDPWTGRVLAMVGGFSFDQSQFNRAT
QAYRQPGSSFKPLVYSAAMDNGYTPSTVVVDAPIEIDQGQGAGVWRPENYSSGKYGGPTT
LRNALRQSLNTVTVRLAQDIGMPLIGEYSKRFGVYDELPNYLSYALGAGETTVMRMVTAY
SMFANGGRRVKPTLIDRIQDRYGRTIFKHDARECRGCDAPGGWKNQTEPQLVDRREQVLD
PMTAYQITSMMEYVVQAGTATVVKEVGKPIAGKTGTTNDEKDAWFIGFSPDLVVGIYVGF
DKPRNLGRGMTGGHLAAPIAKDFLKLALADKPAIPFKVPAGIKLVRVDAKSGMRAGPESG
RTILEAFKPGTAPPDNYSVIGVADMDGRAPQGYSQGYQPDAGNIMRPGTGGLY
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgttggtccggtttttgggtttcctgtttgccgccggcaccgtggtgttcctg
gtcggcgtggccggcgtcgcgggcgcgatctggcatttctccaaggacctgcccgactat
tcgcagcttcaggattacgagccgccggtgatgacgcgcgtgcacgcgtctgacggtgcg
ctgctcggcgagtattccaaggaacgccggctctatctgccgatccaggcggtgccaaaa
ctcgtcatcaacgccttcctggcggcggaagataagaacttctacgagcatggcggcatc
gacttcaccggcatggcgcgagcggccgtgctctatgcgcagaattacggctccaacagg
cgcccgcagggtgcgtccacgatcacccagcaggtcgcgaagaatttccttctgaccaac
gaggtctccttcacccgcaagatcaaggaagccttgctggcgatgcgcatcgagcgcgcc
tattccaaggaccgcatcctcgagctctatctcaacgaaatctatctcggcctcggcgct
tacggcattgctgcggcgtcgctggtctatttcgacaaatcggtgaacgagctcacgatc
gcggaagcttcctatctggcggcgttgccgaaggcgcccgcggcgttgcacccggtgcgt
aaccgcgatcgcgcggtggagcggcgcaattacgtgatcgatcgcctcgtggaaaacggc
tgggtcaagcaggccgacgccgacaagtcccgcaaggagcagctcaacgtcaccagccgc
ggcaacggcgcgcatatcttcgccggcgaatatttcgcggaggaggtccggcgcgacatt
ttcgagcgctacggcgaaaagaagctgtacgagggcggcttgtcggtccgcgccacgctc
gatccgaagatgcaggtgatggcgcgcaagaccatggtcgctggtctcgtcagatatgac
gaagccagcggctggcgcggcgcgccctccaaactcgatatttccggcgactggggcgtg
aaactcgccgacgtcaaatcgctctctgacatctcgccctggcgcatggccgtggtgctc
gagacatccgaccagtcggcgcggatcgggttccagccgggccgcgagctcggtggcgcc
gtcagcaagcagcggcagaccggtatcatcacgctcgatggcgtccgctgggccaaggcc
gcttcgggcccggccaaaggcaggacgccgagttcggtcgcgcaggtgctgtcgccgggc
gacgtgatctatgccgatccgctgttcgacaaggaaggcaagccggtcgagggccagtac
cggctgcgccagttgccggaagtatccggcgcgatggtcgccatggatccgtggaccggc
cgcgtgctggcgatggtcggcggcttctcgttcgatcagagccagttcaatcgcgcgacc
caagcctatcgacagccgggctcgtcgttcaagccgctggtctattcggcggcgatggac
aacggctatacgccgtcaaccgtcgtggtcgacgcgcccattgaaatcgaccagggtcag
ggcgccggcgtgtggcgcccggaaaactattcgtccggcaaatacggcgggccgacaaca
ctgcgcaatgcgctccggcagtcgctgaatacggtgacggtacggctggcgcaggacatc
ggcatgcccctgatcggcgaatattcgaagcgcttcggcgtctacgacgaactgccgaat
tacctgtcctatgcgctcggcgcgggcgagaccacagtgatgcggatggtgacggcctat
tccatgttcgccaatggcggccgccgcgtgaagccaactctgatcgaccggatccaggac
cgctacggccgcaccatcttcaagcatgacgcccgcgaatgccgcggctgcgacgcgccc
ggcggctggaagaatcagaccgagccgcaactggtcgaccgccgcgagcaggtgctggat
ccgatgacggcctaccagatcacctcgatgatggaatatgtggtgcaggccggcaccgcg
acggtggtcaaggaagtcggcaagcccattgccggcaagaccggcaccaccaacgatgaa
aaggacgcgtggttcatcggcttctcgccggacctcgtggtcggcatctatgtcggcttc
gacaagccgcgcaatctcggccgcggcatgaccggcggtcatctcgccgcgccgatcgcc
aaggatttcctgaaactcgcgctcgccgataagccggctattccgttcaaggtgcctgcg
ggcatcaagctggttcgcgtcgatgccaagagcggcatgcgcgccggtcccgagagcggc
cgcaccatcctcgaagcgttcaagccgggcaccgcgccgccggacaattactcggtcatc
ggcgttgccgacatggatggccgggcgccgcagggatactcgcaaggctatcagcctgat
gcgggcaacatcatgcggcccggcaccggcggactttactag
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