Bradyrhizobium icense: LMTR13_22255
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Entry
LMTR13_22255 CDS
T04485
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bic
Bradyrhizobium icense
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bic03016
]
LMTR13_22255
Enzymes [BR:
bic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LMTR13_22255
Transfer RNA biogenesis [BR:
bic03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LMTR13_22255
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANW02487
UniProt:
A0A1B1UIC6
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All DBs
Position
4703743..4704891
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AA seq
382 aa
AA seq
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MDLITTTSDLAAACSRLAQHKVITVDTEFLRETTYYPLLCVVQMASPDEAVVIDTLAPGI
DLKPFFELMGNEAVLKVFHAARQDIEIVWHQSGTIPHPIFDTQVAAMVLGYGDSIAYDQL
VERVTGHRPDKTHRFTDWSRRPLTPEQMHYAISDVTHLRDVFAALDADLKKRGRSDWVSE
EMEVLTSPRTYDFHPERAWERLKSRVRKPKELAVLMEVAAWREQEAQSRDVPRSRVLKDD
AVGDIATHAPTSLERLANLRSLPKGFDRSKWGTDIIAAVQRGLARDHATLPKIEKPRGNS
NGAATVELLKVLLRMTSERHAVASKVIATVDDLDQIAADDHADVAALHGWRRELFGEAAL
ALKHGRLALAIEKGRVVRVDRV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatctgattaccaccacttccgacctcgccgccgcctgctcccggctcgcccagcac
aaggtcatcacggtcgataccgagttcctgcgggagacgacctactaccccctgctctgc
gtcgtgcagatggcgagcccggatgaagccgtcgtgatcgacacgctggcgcccggcatc
gacctcaagccgttcttcgagctgatgggaaacgaggcggtgctgaaggtgtttcacgct
gcccgccaggacatcgaaatcgtctggcaccagtccggcaccattccgcacccgatcttc
gatacgcaagtcgcggccatggtgctgggttatggcgacagcatcgcctatgaccagctc
gtcgagcgcgtcaccggccaccggccggacaagacccaccgcttcaccgactggtcgcgc
cgcccgctgacgccggagcagatgcattacgcgatctctgacgtcacccatttgcgcgat
gtctttgccgccctcgatgccgatttgaagaagcgcggccgcagcgactgggtcagcgag
gagatggaagtcctgacctcgccgcggacctacgatttccaccccgagcgcgcctgggaa
cggctcaagagccgggtccgcaagccgaaggagcttgccgtgctgatggaagtcgcggcc
tggcgcgagcaggaagcgcaaagccgcgacgtgccgcgctcacgcgtgctgaaggacgat
gcagtcggcgacatcgccacccacgcgccgacctcactggagcgtctcgccaacctgcgc
tcgctgccgaaaggctttgaccgctccaaatggggcaccgacatcatcgccgccgtgcag
cgcggcctcgcccgcgatcacgctacgctgccgaagatcgaaaagccgcgcggcaattcg
aatggcgcagcgaccgtcgaactgttgaaagtgctgctgcggatgacgtcggaacgccac
gccgtcgccagcaaggtaattgcgaccgtcgacgatctcgaccaaatcgccgccgacgac
cacgccgacgtcgccgccctgcacggctggcgccgcgaattattcggcgaagcggcgctg
gcgctgaagcacggcaggttggcgctggcgatcgaaaaaggcagggtcgtccgggtcgac
cgggtttaa
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