Bradyrhizobium icense: LMTR13_22840
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Entry
LMTR13_22840 CDS
T04485
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
bic
Bradyrhizobium icense
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bic02000
]
LMTR13_22840
01504 Antimicrobial resistance genes [BR:
bic01504
]
LMTR13_22840
Transporters [BR:
bic02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LMTR13_22840
Antimicrobial resistance genes [BR:
bic01504
]
Gene variants
Tetracycline resistance genes
Transporters
LMTR13_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_5
LacY_symp
TRI12
OATP
Motif
Other DBs
NCBI-ProteinID:
ANW02579
UniProt:
A0A1B1UII9
LinkDB
All DBs
Position
complement(4817358..4818611)
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AA seq
417 aa
AA seq
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MSEQASTAVADDQPPVRSGAAAFIFVTILLDMLALGLILPILPKLVEGFVDNDTATAARI
FGLFGTAWALMQFLFSPILGALSDRFGRRPVVLLSNFGLALDYVLMALAPSLTWLFIGRV
ISGITSASISTAFAYIADVTPPERRAAVFGKIGAAFGAGFILGPAIGGLLGDMDPRLPFW
VAAGLSFANTLYGWLILPESLPRDRRAPFHWKNASPIGALHLLRSNRILAGLALANFFGQ
VAHVVLPSTFVLYATYRYGWDTKTVGLTLALVGVCAMVVQGAGVGPIVKWLGERRALLLG
LASGGLGFFIYGAAPTGPLFWIGIPVMSLWGVAGAAIQALTTQLVAPDQQGQLQGATNSV
NSIAQMAGPFLFTLTFAYFISDQAPVKLPGAPFLLAAALLGLALITAWRTLAGKRDA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggcgtccaccgctgttgccgacgatcaaccgccggtgcgcagcggggcg
gcggccttcattttcgtcaccatcctgctcgacatgctcgcgctcggcctgatcctgccg
atcctgcccaagctcgtggagggttttgtcgataacgacaccgcgacggcggcgcggata
ttcggtctgttcggtaccgcctgggcgctgatgcagttcctgttctcgccgatccttggc
gcgctctcggaccgcttcggccgccggccggtggtgctgctatcgaatttcgggctggcg
ctggattacgtactgatggcgctggcgccgtcgctgacctggctgttcatcggacgggtg
atctcaggcatcacctcggcaagcatttccacggcctttgcctatatcgccgacgtcacg
cccccggaacggcgagccgcggtgttcggcaagatcggcgcggcgttcggcgccggattc
attctcggtcccgccatcggaggcctgctcggcgacatggatccgcgtctgccgttttgg
gtcgcggcgggcttgagctttgcgaacacgctctacggctggctgatcctgccggagtcg
ctgccgcgggatcggcgcgcaccgtttcattggaaaaacgccagcccgatcggcgcattg
catctgttgcgctcgaaccggattctcgccggcctggcgctggcgaatttctttggccag
gtcgcgcatgtggtgctgccgtccaccttcgtgctgtacgcgacctaccgctatggttgg
gatacgaagacggtaggccttacgctggcattggtcggcgtctgcgccatggtggtgcag
ggggcgggcgtcggaccgatcgtcaaatggctcggcgaacgccgcgcgctgctgctcggg
ctggcctccggcgggctgggattcttcatctatggcgcggctccgaccggaccgctgttc
tggatcggtattcccgtgatgtcgttgtggggcgtggcgggggcggcgatccaggcgttg
acgacgcaactcgtcgcgccggatcaacagggccagttgcagggcgcgaccaacagcgtc
aacagcatcgcccagatggcgggaccgttcctgttcacgctgacctttgcatatttcatc
agcgaccaggcgccggtgaaattgccgggcgcgccgttcctgctcgcggcggcattgctg
ggcctcgcgctgataactgcgtggcggacgctggcgggcaagcgcgacgcttga
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