Bradyrhizobium icense: LMTR13_24780
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Entry
LMTR13_24780 CDS
T04485
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
bic
Bradyrhizobium icense
Pathway
bic02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMTR13_24780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bic03000
]
LMTR13_24780
Transcription factors [BR:
bic03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMTR13_24780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
AAA_3
bpMoxR
MCM
AAA_16
AAA_30
HALZ
DUF815
MS_N
HTH_28
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ANW02895
UniProt:
A0A1B1UJG1
LinkDB
All DBs
Position
complement(5239767..5241590)
Genome browser
AA seq
607 aa
AA seq
DB search
MQHNIRKSEQENREDDHNNGDVVMLHIPSVRERPNSNSETDDAVTDVPLYESAIIGIFEI
SKVLTAPCRLEVTLANVVDLLQSFVQMRHGIVSLFHDDGVPDITVGAGWSEGSDERFRMR
LPQKVIDEIVASDRPLVAENVAVHPAFSAADKEVLGASDDMGVSFIGVPIRIDANVVGTL
TIDRILDNASSARLDYDVRLLTMIANLAGQTVKLHRLFACDRERLMAEKDRLQKELSELK
QPARERKKVHVEGIIGDSPALRRLLEKIAVVAKSNSTVLLRGESGTGKELVAKAIHERSA
RAKRPFIKLNCAALPETVLESELFGHEKGAFTSAFTARKGRFELADKGTLFLDEIGEISA
SFQAKLLRVLQEQEFERVGGNQTIKVDVRVIAATNKNLEEAVARNEFRADLYYRISVVPL
LLPPLRERRGDIPLLATEFLRNFNSENGRTLTFDASAIEVLMNCGFPGNVRELENCVQRT
ATLAPGPSIVRDDFACCHGQCLSAMLWKSGSDEMALQPGRIVPVPAKPATSPAEAATSVP
PVGSELAPLAPVGAALVGGAKMTDRERVIAAMERSGWVQAKAARLLGLTPRQIGYALRKY
GVEIKRF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacaatattcgcaaatccgaacaggagaacagggaggatgatcataacaacgga
gacgtcgtcatgctgcatatcccgtccgtacgcgaaaggcctaactcaaattccgagacg
gacgatgcggtcactgatgtgccgttgtacgagagcgcgatcatcgggatcttcgaaata
tcgaaagtactcaccgccccctgccggctggaagtcacgctggccaatgtcgtcgatctt
ctgcaatcgtttgtgcagatgcggcacggcatcgtctctctgttccacgatgatggcgtg
ccggacattaccgtgggcgccggctggagcgaaggcagcgacgagcgcttccggatgcgc
ctgccgcagaaagtaatcgacgagatcgtggcgtcggacaggccgctcgtcgccgaaaac
gtagcagtgcatccggcctttagtgctgcggacaaggaggtgctcggcgcctccgacgac
atgggagtgtcgttcatcggcgttcccattcgcatcgatgcgaatgtcgtgggcacgctg
acgatcgatcgcatcctggacaacgcgtcgagcgcccggctcgattacgacgtacggctg
ctcacaatgatcgccaacctagcagggcagacagtgaagctgcatcgcctgttcgcgtgt
gaccgcgagcgactgatggcggagaaggaccggctgcaaaaggaattgtccgagctcaaa
cagcctgcgcgggagcgcaagaaggttcatgtcgaggggatcattggcgacagcccggcg
ctgcgcaggttgctcgagaagatcgcggtcgtagccaaatcaaacagcacggtgctgttg
cgcggcgagtccggtaccggaaaggagctggtcgccaaggccattcacgagcggtcagcg
cgcgccaagcggcccttcataaaactcaattgcgcggcgctgcctgaaacggtactggaa
tccgaattgttcggtcatgagaagggtgcctttaccagcgcgttcactgcacgcaagggc
cgcttcgagctcgccgacaaggggacgctatttctggatgagatcggcgagatctcggcc
tcgttccaggcaaagctactgcgcgtactgcaggagcaggaattcgagcgcgtcggcggc
aaccagaccattaaggtcgatgttcgcgtgattgccgccacgaataagaacctggaagag
gcggtggcaaggaacgagttccgcgccgacctctattatcgcatcagcgtggttcccttg
ctgctgccgccgttgcgcgaaaggcgcggtgatattccgctcctcgccaccgagtttctc
aggaatttcaacagcgagaacggccgcacgcttaccttcgatgcgagtgcgattgaagta
ctgatgaactgcggttttcccgggaatgtccgcgagcttgagaattgcgtgcagcggacc
gcgactctggcaccaggaccatcgatcgtgagagacgactttgcctgctgccacggccag
tgcctttccgcgatgctgtggaagagcggatcggacgagatggcgctgcagccggggcgg
atcgtaccagtgcccgccaagccggccacgtcgccggccgaggctgctacatcggtcccg
cctgtcggcagcgagctggctccgctagcgccagtcggcgcagccctcgtaggtggtgcg
aagatgacagatcgcgagcgtgtcatcgcggccatggaaagatccggctgggtgcaggcg
aaggcggcgcgcctgcttggacttacgccgcgccaaattggctacgccctgaggaaatat
ggcgtcgagatcaagcgcttctaa
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