Bradyrhizobium icense: LMTR13_31910
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Entry
LMTR13_31910 CDS
T04485
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00071
Fatty acid degradation
bic00280
Valine, leucine and isoleucine degradation
bic00310
Lysine degradation
bic00362
Benzoate degradation
bic00380
Tryptophan metabolism
bic00410
beta-Alanine metabolism
bic00640
Propanoate metabolism
bic00650
Butanoate metabolism
bic00907
Pinene, camphor and geraniol degradation
bic00930
Caprolactam degradation
bic01100
Metabolic pathways
bic01110
Biosynthesis of secondary metabolites
bic01120
Microbial metabolism in diverse environments
bic01200
Carbon metabolism
bic01212
Fatty acid metabolism
Module
bic_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LMTR13_31910
00650 Butanoate metabolism
LMTR13_31910
09103 Lipid metabolism
00071 Fatty acid degradation
LMTR13_31910
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LMTR13_31910
00310 Lysine degradation
LMTR13_31910
00380 Tryptophan metabolism
LMTR13_31910
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LMTR13_31910
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LMTR13_31910
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LMTR13_31910
00930 Caprolactam degradation
LMTR13_31910
Enzymes [BR:
bic01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LMTR13_31910
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LMTR13_31910
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LMTR13_31910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
Methyltransf_31
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ANW04066
UniProt:
A0A1B1UMU3
LinkDB
All DBs
Position
complement(6899163..6901256)
Genome browser
AA seq
697 aa
AA seq
DB search
MDSQIMNVLGDRLLELGPKPDASSPYKNFRLTRDGDGVAWLLFDREGTSANTLSADLIEE
LDKVLSELEGQRPTGLVIRSAKKSGFIAGADVNAFRGATDVAAVETEIGRAHAVIDRLEA
LRVPSVAVIHGFCLGGGLEVALACQMRIAIEGARFGFPEVMLGLHPGLGGTVRFTQLVNP
MQAMPLMLTGKTIDARRAKSLGLVDAVTQERHVRNAMKDAVSGRLKRAKPGLLNNLVNLG
FARGFLAGRMRSEAAKAAREEHYPAPYALIDLWEKHGGDRRAMLNAEKASFARLMVTPTA
QNLIRVFFLREQMKKLAGSGNKIEHVHVIGAGAMGGDIAAWCAGQDLRVTLADMKPEPIA
GAIKRAADLYGKILRKRTAMRDVLDRLMPDMHAEGVRNADLIIEAVPEKLELKQKVYAGI
EPKMKPGAILATNTSSIPLQDLRTTLQKPERLVGLHFFNPVSRLQLVEVVSHDGTDVQLL
AEALAFVGAIDRLPLPVKSSPGFLVNRALTPYMLEAMLMLDEKIDKTVIDAAAKKFGMPM
GPIELADQVGLDICLDVGDMLRSKFGDQLPPTPAWLREKVAKGELGRKTGKGFYTWKGGK
AETGAMSAISEPSAEMIDRLILPMSNVCVACLREGIVDNADVVDGAVIFGTGYAPFRGGP
LNYARTRGVENVVSTLDALTDKFGGRFVPDAGWETFK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatagccagatcatgaacgttctcggcgatcgcctgctcgaactcgggccgaagcct
gacgccagtagcccgtataagaatttccggctgacccgcgatggcgacggcgtcgcctgg
ttgttgttcgatcgcgaaggtaccagcgccaatacgctgtcggcggacctgatcgaggaa
ctcgacaaggttttgtccgagctggagggccagcgtcccacgggcctcgtcattcgttcc
gccaaaaaatccggcttcatcgccggtgccgacgtcaacgcctttcgcggcgcgaccgac
gtggcagcagtcgagaccgagatcggccgcgcgcatgcggtaatcgatcgtctcgaggcc
ttgcgcgttccgagtgtcgccgtaatccacggcttctgccttggcggcggcctggaggtg
gcgctggcctgccagatgcggattgcgatcgagggcgcgcggttcggctttcccgaggtg
atgctcggcctgcatcccggcctcggtggcaccgtacgcttcacgcagctcgtcaatccg
atgcaggcgatgccgctgatgctgaccggcaagaccatcgatgcccgccgcgcaaaatcg
ctcgggctggtcgatgccgtgacacaggaacgccacgtgcgcaatgccatgaaagacgcg
gtgtccggccgtttgaagcgcgcgaagcccgggctgctgaacaatctggtcaacctcggc
tttgcccgaggattcctcgccgggcggatgcgcagcgaggctgcgaaggccgcgcgagag
gagcactatcccgcgccctatgcgctgatcgatctctgggaaaagcatggcggcgaccgg
cgggcgatgctgaatgcggagaaagcgtctttcgccagattgatggtgacgccgactgct
cagaacctgatccgcgtgttcttcctgcgcgagcagatgaagaagctcgcgggatcaggc
aacaagatcgagcatgtccacgtcatcggcgccggcgcgatggggggcgatatcgccgcc
tggtgcgccggccaggatttgcgggtgacgctagccgacatgaagccggagccgatcgca
ggcgcgatcaagcgcgccgccgatctctacggcaagatcctgcgcaagcggactgccatg
cgcgatgtgctggaccggctgatgccggacatgcacgccgagggcgtccgcaacgccgat
ctcatcatcgaggcggtgccggagaagctggagctgaagcagaaggtctatgccgggatc
gagccgaagatgaagccgggcgcgatcctcgccaccaacacgtcgagcataccgctgcag
gatcttcgcaccacgctgcaaaagccggagcggctggtcgggctgcacttcttcaacccg
gtatcgcggctgcaactcgtcgaagtcgtcagccatgacggcacggatgtgcaactcctg
gcggaggcgctggcgttcgtcggcgccatcgaccgcctgccgctgcccgtgaagtcctca
cccggtttcctcgtcaaccgcgcgctgacgccctacatgctggaagcgatgctgatgctg
gacgagaagatcgacaagacggtgatcgatgcggccgcaaagaaattcggcatgccgatg
gggccgatcgaactcgccgatcaggtcggcctcgacatctgtctcgatgtcggcgacatg
ctgcgctcgaagttcggtgaccagttgccgccgacgccggcctggttgcgcgaaaaagtg
gccaaaggcgaactcggccgcaagaccggcaagggtttttacacctggaagggcggcaag
gccgaaaccggcgccatgtccgcgatctcagagccgtcggcggaaatgatcgaccggctg
attctgccgatgtcgaatgtatgcgtcgcatgtctgcgtgagggcatcgtcgacaatgcc
gacgtggtcgacggtgcggtcatcttcggcaccggctacgcgccgttccgcggtggtccc
ttgaactatgcgcgtacccgcggcgtggagaacgtggtctcgacattggacgcgctgacc
gacaaattcggcggaagatttgtgccggatgccggctgggagactttcaagtga
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