Bradyrhizobium icense: LMTR13_38000
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Entry
LMTR13_38000 CDS
T04485
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00020
Citrate cycle (TCA cycle)
bic00190
Oxidative phosphorylation
bic00650
Butanoate metabolism
bic00720
Other carbon fixation pathways
bic01100
Metabolic pathways
bic01110
Biosynthesis of secondary metabolites
bic01120
Microbial metabolism in diverse environments
bic01200
Carbon metabolism
Module
bic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bic_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LMTR13_38000
00650 Butanoate metabolism
LMTR13_38000
09102 Energy metabolism
00190 Oxidative phosphorylation
LMTR13_38000
00720 Other carbon fixation pathways
LMTR13_38000
Enzymes [BR:
bic01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LMTR13_38000
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ANW05074
UniProt:
A0A1B1UQS2
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All DBs
Position
8196689..8198530
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AA seq
613 aa
AA seq
DB search
MAAEGNGKATSRSGPATNGKAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKV
FPTRSHTVAAQGGISASLGNMHPDDWRWHMYDTVKGSDWLGDQDAIEYMVRNAPEAVYEL
EHWGVPFSRTEDGKIYQRPFGGMTMDYGKGQAQRTCAAADRTGHAMLHTMYGQALRHSAE
FYIEFFAIDLIMDDQGACRGVIALKLDDGTLHRFRAQTTILATGGYGRAYASCTSAHTCT
GDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGCLVTEGARGEGGYLVNSEGERFMERYAPS
AKDLASRDVVSRSMTIEIREGRGVGKKKDHIYLHLDHLDPKVLQERLPGISESAKIFANV
DVTREPIPIVPTVHYNMGGIPTNYHAEVLTKKDGDDNAVVPGLMAIGEAACVSVHGANRL
GSNSLIDLVVFGRAAALRLAEKLTPNGKQPELPKDSADMALGRLDHYRHASGGTPTAKLR
DSMQHVMQNNCAVFRTGEILHEGQNLIHKVHGGIGDIATTDRSLVWNSDLVETLEFDNLI
VQAVVTMDSAANRTESRGAHAREDFAERDDKNWMKHTLAWIDPNGKTTIDYRPVHDYTMT
NDVQYIPPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaggtaacggcaaggccacgagccgcagtggcccggccaccaacggaaaa
gcctatccgatcgaggaccacacctacgatgtcgtggtggtgggcgccggcggcgcgggt
ctgcgcgcggtggtcggctgcagcgaggccggcctgcgcaccgcctgcattacaaaggta
ttcccgacccgctcgcacacggtcgcagcccaaggcggcatttcggcttcgctcggcaac
atgcatccggacgactggcgctggcacatgtacgacaccgtcaaggggtcggactggctc
ggcgaccaggacgcgatcgaatacatggtgcgcaacgcgccggaggccgtctacgagctc
gaacattggggcgttccgttctcgcgcaccgaggacggcaagatctaccagcgtccgttc
ggcggcatgaccatggactacggcaagggccaggcgcagcgcacctgcgccgccgccgac
cgcaccggtcacgccatgctgcacacgatgtacggccaggcgctgcgccattcggccgag
ttctacatcgagttcttcgccatcgatttgatcatggacgaccagggcgcctgccgcggc
gtcatcgcgctcaagctcgacgacggcacgctgcaccgctttcgtgcccagaccacgatt
ctggccaccggcggctacggccgcgcctacgcctcctgcacctcggcgcatacctgcacc
ggcgacggcggcggcatggtgttgcgcgccggcctgccgctgcaggacatggagttcgtc
cagttccacccgaccgggatttacggcgccggctgcctcgtcaccgagggcgcccgcggc
gaaggcggctacctcgtcaattccgagggtgagcgcttcatggaacgctatgcgccgtcc
gccaaggacctcgcctcgcgcgacgtggtttcccgctcgatgaccatcgagatccgcgag
ggccgcggcgtcggcaagaagaaggaccacatctacctgcacctcgatcatctcgatccg
aaggtgctgcaggaacggctgcccggtatttccgaatcggcgaagatcttcgccaatgtc
gacgtcacccgtgagccgattccgatcgtgccgaccgtgcactataacatgggcggcatt
cccaccaattatcacgccgaagtcctgaccaagaaggacggcgacgacaatgctgtggtg
ccgggcctgatggcgatcggcgaagcggcttgcgtgtccgtgcatggcgccaaccggctc
ggctccaactcgctgatcgacctcgtcgtattcggccgcgccgccgcgctgcggctcgca
gaaaagctgacgccgaacggcaagcagccggagttaccgaaggattccgccgacatggcg
ctcggacggctcgatcattaccgccacgcttccggcggcacgccgaccgcgaagctgcgg
gacagcatgcagcacgtgatgcagaacaattgcgcggtgttccgcaccggcgaaatcctt
cacgaaggccagaacctgatccacaaggtgcatggcggcatcggcgacatcgcaaccacc
gaccgctcgctggtctggaattcggatctggtcgagacgctggaattcgacaatctgatc
gtgcaagcggtggtcaccatggattcggcggcgaaccgcaccgaaagccgcggcgcccac
gcgcgcgaggattttgccgagcgcgacgacaagaactggatgaagcatacgctggcgtgg
atcgacccgaacggcaagaccacgatcgattaccgcccggtgcacgactacacgatgacg
aacgacgttcagtacatcccgccgaaggcgcgggtgtattga
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