KEGG   Beijerinckia indica: Bind_0372
Entry
Bind_0372         CDS       T00688                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bid  Beijerinckia indica
Brite
KEGG Orthology (KO) [BR:bid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bid03400]
    Bind_0372
Enzymes [BR:bid01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bind_0372
    5.6.2.6  RNA 3'-5' helicase
     Bind_0372
DNA repair and recombination proteins [BR:bid03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Bind_0372
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ACB94026
UniProt: B2IE02
LinkDB
Position
428599..431142
AA seq 847 aa
MKRGLIQKEPLPPRFAAWFAARGWSPRAHQQHLLALAQQQENALLIAPTGAGKTLAGFLP
SLVDLEQKRNRDGLHTLYISPLKALAVDVERNLQMPIAEMGLKITVETRTGDTSTAKRLR
QRRQPPDMLLTTPEQLTLLLATADAEHLFADVRRVIFDELHAIAPSKRGDLLSLGLARLR
TLAPMMRTTGLSATVRAPEDLQRWLVSQQDANALATLITAPPGAPADLRILDSDNALPWA
GHSAAHALREIYAAIEAATMTLVFVNTRAQAEYVFQELWRINEKSLPIALHHGSLDAGQR
RKVEAAMVQNRLKAVVCTSTLDLGIDWGAVDLVINVGAPKGASRLAQRIGRANHRLDEPS
RALLVPANRFEVLECHAAVEAARAGTQDTAAARAGALDVLCQHLLGMACVGPFDPQRLYE
EVITAAPYAGLSRKDFDAALNFAAHGGYALKAYERFAKLKPMPDGRWRIANGRVAQAYRM
NCGTIVEADMLRVRLVPGSEGGRRKSGQPLKTAYTGPLRRGGRILGEIEDYFIETLRPKD
TFLFGGEILALQGIAGDEALVVRSHAETPKIPSYAGGKFPLSTYLAKRVRELLSTPEEWN
QLPPQVVEWLALQKHVSRLPPPEALLVETFARGGHFHLVAYPFEGRLAHQTLGMLLTRRM
ERAGLQPLGFVANDYALCVWSRADVGAWCEDNKYALNALFAKDMLGDDLEEWLHESALMK
RTFRNCAIIAGLIERNFPGKQKAGRQESRRVTISTDLIYDVLRRHEPDHVLLRAARADAA
TGLLDLERLGLMLARVRHKIIHQPLTHISPLAVPIMLEIGRERVYGEAQDALLAEAAADL
AAEAMAP
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgaagcgcgggctcattcagaaagagccgttgccgccgcgttttgccgcctggttcgcg
gcgcgcggctggagcccgcgggcacatcagcagcatcttctggctttggcgcaacagcag
gaaaatgcgcttctgatcgcgccgacgggggccggcaaaacgctcgcgggtttcctgccc
tccctcgtcgatctggaacaaaagcgcaatcgtgatgggctgcatactctttatatttcg
cctctgaaggcgcttgcggtcgatgttgaacgcaatctgcaaatgccgattgccgaaatg
ggcctcaagattacggttgagacacgcacgggcgatacatccaccgccaagcgtctgcgt
cagcgtcgtcagccaccggatatgctgttgacgacgccggaacaactgacgttgctgctc
gccacagccgatgccgaacatctcttcgccgatgtgcgacgcgttattttcgatgaattg
catgcgatcgcgccctcgaaacgaggcgatcttctgagcctcggcctcgcgcggctacgt
acgctcgcgcccatgatgcggaccacgggcctttcggcgaccgtgcgcgcgccggaggat
ttgcaacgctggctcgtctcgcaacaagatgcaaatgccctcgccacattgatcacggcg
ccccccggcgctcccgccgatttacgcattcttgacagtgacaatgctttgccttgggct
ggccatagcgccgcccatgcgctgcgtgagatttatgccgcgatcgaggccgcgaccatg
acgttggttttcgtcaatacgcgcgcccaggcggaatatgtgtttcaggaactctggcgc
attaatgagaaatccttgccgattgccttgcatcatggctcgcttgatgccggccaaagg
cgcaaggtcgaagcggcaatggtacaaaaccggctcaaggcggtggtctgtacgtcaacg
ctcgatcttggcatcgattggggggccgtcgatctcgtgatcaatgtcggcgcgcccaag
ggcgcgagccggctcgcgcaaaggattggccgggcgaaccatcgcctggatgaaccgtcc
cgcgcccttctcgtgccggccaatcgcttcgaagtgctcgaatgtcatgccgccgtggaa
gcggcgcgcgccggcacgcaggatacggctgctgcacgcgctggcgcgctcgatgttttg
tgtcagcatttgctcggcatggcttgtgtcggtcctttcgatccgcaaaggctttatgaa
gaagtgatcacggccgcgccctatgcgggcttaagccgaaaggatttcgacgcggctctg
aattttgcggcccatggtggctatgcgttgaaggcttatgaacggttcgctaagctcaag
cccatgccagacgggcgctggcgcatagccaatggccgtgtggcacaggcctatcgcatg
aattgtgggacaattgtcgaggccgacatgctcagggtccgccttgtgccgggctcggag
gggggacggcgaaaaagcggtcagccgctcaagacggcttatacgggcccattgcggcgc
ggtggccgaatactcggcgagatcgaggactattttatcgagactttgcggccaaaggat
acatttcttttcggcggcgagattctggcactccaagggattgcgggcgatgaagccttg
gtggtgcgcagtcacgccgagacgccgaaaattccgtcttatgccggtggcaagtttccg
ctctcgacctatcttgccaaacgcgtacgcgaattgctctcgactcccgaggaatggaac
caattgccaccgcaggtcgtcgaatggttggcgctgcagaaacatgtttcccgtctgcca
ccccctgaggctttgcttgtcgaaactttcgcgcggggtggtcattttcatctcgttgcc
tatccttttgagggccgtctcgcgcatcagacgcttggcatgttgttgacacgaagaatg
gaacgggccggtctgcaaccactcggcttcgtcgccaatgattatgctctgtgtgtttgg
tcgcgcgccgatgtcggcgcctggtgcgaggacaataaatatgcgctgaatgcgcttttc
gcgaaggatatgctgggcgatgatctcgaggaatggctgcatgaatcggctctgatgaaa
cgcacattccgtaattgcgcgatcatcgccggattgatcgagcggaatttcccgggcaaa
cagaaagctgggcggcaagagtcgcggcgagtgaccatttcgaccgatctcatctatgat
gtcttgcgacggcacgaacctgaccatgtgctgttgcgagcggcccgtgccgatgcggcg
accggccttcttgatctcgaacgattggggctaatgctggcgcgtgtgcggcataaaatc
atccatcagcccttgacgcatatttcgccgctcgccgtgccgatcatgctcgaaatcggc
cgtgaaagggtctatggcgaggcccaggatgcgcttttggccgaagccgcggcggatctg
gcggcggaagcgatggcgccctga

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