Beijerinckia indica: Bind_0787
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Entry
Bind_0787 CDS
T00688
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bid
Beijerinckia indica
Pathway
bid03420
Nucleotide excision repair
bid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bind_0787
03430 Mismatch repair
Bind_0787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bid03400
]
Bind_0787
Enzymes [BR:
bid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bind_0787
DNA repair and recombination proteins [BR:
bid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bind_0787
MMR (mismatch excision repair)
Other MMR factors
Bind_0787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DUF3553
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACB94437
UniProt:
B2IH23
LinkDB
All DBs
Position
complement(879153..881555)
Genome browser
AA seq
800 aa
AA seq
DB search
MTDPSSRHDHDVPLDSSMESPMPKPGGIADRARARRGDFAYLDGLNPEQRRAVEALEGPV
LVLAGAGTGKTRVLTTRIAHILATGRARAHEILAVTFTNKAAREMKERVAALVGPVAEGM
PWLGTFHAISTKILRRHAELVGLQSTFTILDTDDQIRLLKQVLQAANIDEKRWPARSLSY
QIDAWKNRGLDPAHVPPGEAAAFANGRGADLYAHYQERLKTLNAADFGDLLLESLRLLRD
NPDVLRLYQDRFRYMLVDEYQDTNSVQYLWLRLLAQGRHNVCCVGDDDQSIYGWRGADVD
NILRFETDFPGATIIRLERNYRSTGHILGTAARLIAHNDGRLGKTLFTDDAPGLKPAVTG
VWDSEEEARSIGEEIEQLQRQGEGLDEIAILVRASFQMREFEERFITLGLPYRVIGGPRF
YERAEIRDALAYLRCVAQPADDLAFERIFNVPKRGLGDATLQLLYDAARRERIPLMQMAA
IMVETEELKPKQRQTLRSLLEDFNRWRSLIEAKPQGELAEMILEESGYTDMWQKDRTAEA
AGRLENLKELVRSMEEFPDLGSFLEHISLVMDAENQAGGPRVSIMTLHAAKGLEFETVFL
PGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRLHLYFATNRRIHGLWQTTIPS
RFLDELPAENVEVREAASGTAYGGYAQSRFANMDSYGSSYSTPGWQRAQRHQESKQRGSS
GQTGGGQEAFKQKNARRGPLQIEGELVAKSSAGSSFAQGARVFHSKFGPGTVAAIDGNKV
TVDFDKAGRKMVLESFLQAG
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatccttcctcccgtcatgatcacgatgtgcctctagattcgtccatggaatcc
cccatgccgaaaccgggcggcattgccgatcgcgcgcgtgcccggcggggagattttgcc
tatctcgatggcctcaacccagaacaacgccgcgccgtggaggctttggaaggacccgtt
ctggtgctggccggcgccggcaccggcaagacgcgggtgctcacgacccgcatcgctcat
attctggcgaccggaagagcacgggcgcatgaaattctcgccgtgaccttcaccaacaag
gccgcgcgggaaatgaaagagcgcgtcgcggctctcgttggcccggtggccgagggcatg
ccctggctcggtacgttccacgccatttccaccaaaatcctgcgacgccatgccgaattg
gtcggtctgcaatcaacattcaccattctcgacacggacgaccagatccggcttttgaaa
caggtgctgcaagccgccaatatcgacgagaaacgctggccggcgcgctccttgagttat
cagatcgatgcctggaagaatcgagggctcgatcccgcccatgtgccgccgggtgaagcg
gccgcctttgccaatgggcgcggggccgatctctacgcccattatcaagaacgactcaaa
accctgaatgccgccgatttcggtgaccttttgctcgaaagcctgcggctgctgcgcgac
aatcccgatgttctgcgcctttatcaggaccgtttccgctatatgttggtcgatgaatat
caggacaccaatagcgtccaatatctctggctgcggctgctggcgcaggggcgccataat
gtctgctgcgtcggcgatgacgatcaatcgatctatggctggcgcggcgccgatgtggac
aatatcctgcgtttcgagacggatttccccggcgccacgatcattcgcctggagcgcaat
taccgttcgacaggccatattctcggcacggccgcgcgccttatcgcccataatgacgga
aggctgggcaaaaccctcttcaccgatgacgcgccgggcctgaaacccgccgtgacgggc
gtttgggattcggaggaggaagcccgatccatcggtgaggagatcgaacaattacaacgc
cagggcgaggggcttgacgagatcgccattctggtgcgcgcttcgttccagatgcgcgaa
ttcgaggaacgtttcattaccctcggcctgccctatcgcgtcatcggcggcccccgtttt
tatgagcgcgccgaaatccgcgatgcgctcgcttatctgcgctgcgtggcgcaaccggcc
gatgatctcgccttcgagcgcattttcaacgtgccgaaacgcggcctcggcgatgcgacc
ctgcagcttctctacgatgccgcgcggcgcgagcgtattccgctcatgcagatggcagcc
atcatggtcgaaacggaggagttgaagcccaagcagcgccagaccctgcggagccttctt
gaggatttcaatcgctggcgcagcctcatcgaggccaagccacaaggcgaactcgccgaa
atgatcctggaggaatccggctataccgacatgtggcagaaggaccgcacagcggaagcg
gcgggcaggctcgaaaacctcaaggaactcgtccgctcgatggaggaatttcccgatctc
ggctccttcctcgaacatatttctttggtcatggatgctgagaaccaggctggcgggccg
cgtgtctccatcatgaccctgcatgccgccaagggtctcgaattcgagactgtctttctg
cctggctgggaggaaggcttgtttccgcaccaacgctcgctggatgaatcaggccgcgcc
gggctcgaggaggaacgccgcctcgcctatgtcggcattaccagagccaagcggcggctg
catctttatttcgccaccaaccggcgcattcacggcctttggcagacgacgatcccctca
cgttttctcgatgaattaccggcggaaaatgtcgaggtgcgggaagcagcatccggcacc
gcctatggcggctatgcgcaatcgcgctttgccaatatggattcctatggctcctcctat
tcgacgccgggctggcaaagagcgcagcggcatcaggagagcaaacagcgcggaagcagc
gggcaaaccggcgggggacaagaggctttcaagcaaaagaatgcgcggcgtggccctttg
cagatcgagggggaactcgtcgcgaaatcgagcgccggatcaagttttgcgcaaggcgcg
cgagtctttcattccaaattcggtcccggcactgtcgctgcaatcgatggcaataaagtc
actgtcgatttcgacaaggccggacgcaaaatggtgctcgaaagctttttacaagcgggt
tga
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