Beijerinckia indica: Bind_2376
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Entry
Bind_2376 CDS
T00688
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bid
Beijerinckia indica
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bid03009
]
Bind_2376
Enzymes [BR:
bid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Bind_2376
Ribosome biogenesis [BR:
bid03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Bind_2376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ACB95987
UniProt:
B2IHU4
LinkDB
All DBs
Position
2714654..2716240
Genome browser
AA seq
528 aa
AA seq
DB search
MRKTSDGRPPRASVGAAPRKAGTKPGFSKPGFSKPSPSRPGPSKPSSKPGPSAPPRPSKT
QGSKVSSFKGQKPRFAKPVLAEQKDAQEPQRIAKVMARAGLCSRRDAEAWIAEGRVSVNG
TVLTQPGVSVSDEDVILVDGEKLAARGHTRLFLFHKPRGLVTTNHDPEGRPTVFDYLHER
HPDMPRVLSIGRLDINTEGLLLLTNDGGLSRLLELPTTGWVRRYRVRAKGTTDQAVLDQL
RQGITIDGIHYAGMEVTFDREQGANSWLTLSLREGKNREVKRVLEQIGLEVNRLIRLSFG
PFQLGDLPEGDVTEVRTRVLRDQLGPSLAAAAGVDWTRHDEDAAEPAAPERARKTPSKTR
TEGKSVTKSHGAAPRPSSRTFTKDKPREDEHPARTAKPAPRSRKHISLLRAEDENRKGAP
RKRVEAQEIADRHGRVVTVEHRVTAGPTSKRAEPATRNAKRFAAAHAAAEKAERYAKFEA
KKAKGLGGEAHASRGKEGKPKGAVRGKQDTRPQSRKSPVGGGKSFKKN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagacgtcagacggccgtcctccccgcgcatcggtgggcgcggccccgagaaag
gctggaaccaagcctggcttttcaaagcctggtttttcaaagcctagtccttcaaggcct
ggcccttcaaagcccagttccaagcccggcccttccgcgcctccgcgtccttccaagacg
caagggtccaaagtctcttcgtttaaaggtcagaaaccgcgtttcgcgaagcccgtcctc
gcggaacaaaaggacgcgcaagagccacaacgcattgccaaggtcatggcccgtgccggg
ctctgctcgcgccgtgacgcggaagcctggatcgcggagggtcgcgtcagtgtcaacggc
accgtcctgacacaaccgggcgtgagcgtcagcgacgaggatgtgattctggtcgatggc
gaaaaactcgctgcgcgcggtcacacgcggctgtttctcttccacaagccgcgcggactg
gtgacgaccaatcatgatcctgaaggccggcccaccgtcttcgattatctgcatgagcgc
cacccagacatgccgcgcgtcctcagcatcggcaggctcgacatcaataccgaagggctg
ttgctgttgaccaatgacggcgggctttcgcgcctgctcgaattaccgacgaccggctgg
gtgcgccgttatcgcgtgcgcgccaagggcacgactgatcaggccgtgctcgatcaattg
cgccagggcatcaccatagacggcattcattatgccggcatggaagtcacgttcgaccgc
gagcaaggcgccaatagctggctcacgctgagcctgcgcgagggcaagaaccgcgaggtc
aagcgtgtgctggaacagatcgggctggaggtcaatcgcctgatccgcctctcctttgga
cctttccagcttggcgatctgcccgagggagacgtcacagaagtgcgcacccgcgttctg
cgcgatcaattagggccgagcctcgcggcggcggcgggcgtcgattggacacgccatgac
gaggatgctgccgaaccagcagcccccgagcgcgcgagaaaaacaccgtcaaagaccaga
acagagggcaagtccgttacaaaatcccacggggcagcgcctcgcccttcgtccaggaca
ttcacgaaagacaagccgagagaagacgaacatccagcgcggacggccaaaccggcacca
cgctcacgcaaacatatttcgcttctgcgtgctgaagacgaaaaccgcaagggtgcgccc
cgcaagcgcgtcgaagcccaagaaatcgccgaccgccatggtcgcgtggtcacggtcgaa
catcgtgtgacagctggacccacgtcaaagagggccgaacccgcaacgcgcaacgcaaag
cgtttcgctgccgcccatgccgccgctgagaaagccgaacgctacgccaaattcgaggcg
aaaaaggcgaagggtttaggcggtgaagcccatgcatctcgcggcaaagaaggcaagccg
aaaggcgctgtccgcgggaaacaggatacgcggccccagagccgaaagagccctgtcggc
ggcggcaaaagtttcaagaagaattga
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