Beijerinckia indica: Bind_2383
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Entry
Bind_2383 CDS
T00688
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bid
Beijerinckia indica
Pathway
bid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bind_2383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bid03019
]
Bind_2383
Messenger RNA biogenesis [BR:
bid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bind_2383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Cupin_6
Motif
Other DBs
NCBI-ProteinID:
ACB95994
UniProt:
B2IHV1
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All DBs
Position
complement(2722330..2724000)
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AA seq
556 aa
AA seq
DB search
MSEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNP
AFIEKLRQDLVAIIVTHAHEDHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDV
PLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAGTLIHSGDWKIDAEPGLGKET
DAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVA
RIRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLA
TGSQGESRAAIARIAEGEHQIVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVIT
DRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLAEHARFALEHGAEQVVRARNG
DLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDL
AGVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVA
AAWGKKPAVHVLVIEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggttgcgaacgaactggtcttcgtgcccctgggtggtctcggcgaaatcggg
atgaatttcgccctctatggcttcggacccaaaaccaagcgcaaatggatagcggtcgat
tgcggtcttgctttcgcggggccggaacatttcggcatcgacctcatcctgcccaatcca
gccttcatcgagaaattgcgtcaggatctggtcgcgatcatcgtcactcacgcccatgag
gatcatatcggggcgcttcccgatctttggccgcgcctcggttgccctatctatgcgacg
cgttttgcggcgagcttgctcgaggccaagcgtttggcggagcccggcgctccagatgtt
cccctgctgactgtcgatcagggagaggttttgcgtctcgatcccttcacgatcgaattc
attcccatggcgcattccatccccgaaagctgcgccctggcgatccgcacggaagccggt
actctgattcattccggcgattggaagatcgatgccgagccgggtcttggcaaggagacc
gatgccaagcgcctgaccgagatcggcgatgaaggcgttctggctttgatctccgattcg
accaatattctgcgtgaaggtatcagcccttcggaaggcgatgtcgcgcgggcattgcgg
gatattattttgaatgcgacgggccgtgttatcgtcacgacctttgcgtccaatgtcgcg
cgtatccgcgcggtcgccgaggccgccatggccgcgcggcgcaatgtcgttctggtcggg
cgcgccatggagcgggtcgtcggcattgcccgcgatctcggctatctggatggcattccc
ctgtttctctccatggatgcctatccgcatctgccgcgtgacaaagtcgtggttctagcc
accggcagccagggtgagagccgtgcggcgatcgcgcggatcgccgaaggcgagcatcag
atcgtcaatctgagccctggcgatcaagtgattttctcctcccgcaccattcccggcaat
gagcgggatgtcgggcggatcatcaatcaattcatccgtgccggtgtcgaggtcatcacc
gatcgtaatgccctcgtgcatgcctctggacatccaaggcgtggcgaggtggaacagctc
tatcgctgggtgcggccgaaaatcgccgtcccggctcatggtgaggagattcaccttgcc
gaacatgcgcgtttcgcactggagcatggggccgagcaagtggtgcgcgcccgtaatgga
gatctcgttgttctcgcgccgggccaggccgcgattatcggtgaggtgccttctggtcgt
ctctacaaagacggcaacagcctgatcaaggccgatgacgatgctttgcgcgcgcgacag
aagcttgctttttcagggatcgtgaccatcggtatggcgattaccgcgaagggcgatctg
gccggcgtgccggatgtggtgattgctggcatgccgggccggacccaggatggcgccgtg
atcgatgcggttgttgacgaagctctctttcagacctttgatcatctgccgcgtcagaag
cgacgcgatgctgatcttgtctcctcggcgattgagaaggccgtgcgcaatgccgtcgcc
gcggcctggggcaagaagcccgcggtccatgttctggtgatcgaagtgtga
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