Beijerinckia indica: Bind_3192
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Entry
Bind_3192 CDS
T00688
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bid
Beijerinckia indica
Pathway
bid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bind_3192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bid03019
]
Bind_3192
03016 Transfer RNA biogenesis [BR:
bid03016
]
Bind_3192
Enzymes [BR:
bid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bind_3192
Messenger RNA biogenesis [BR:
bid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bind_3192
Transfer RNA biogenesis [BR:
bid03016
]
Prokaryotic type
tRNA degradation factors
Bind_3192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
aRib
Motif
Other DBs
NCBI-ProteinID:
ACB96752
UniProt:
B2ICY4
LinkDB
All DBs
Position
complement(3631021..3633168)
Genome browser
AA seq
715 aa
AA seq
DB search
MHMFEIHREEIEWAGRKLVLETGKIARQADGAIFATYGETTVLATVVSAKSVKPGVDFFP
LTVNYQEKAFAAGRIPGGYFKREGRPSERETLVSRLIDRPIRPLFPEGYRNETQVIVTVL
AHDLENDPDILSMVASSAALTLSGVPFMGPVGAARVAYVNGQYKINPTLDEVKDTALDLV
VAGTSDAVLMVESEAKELSEDVMLGAVMAGHSSFQPVIDAIIRLAEKAAKEPRDLILPDK
TEVEVAVLAIAENDLREAYKITSKQDRYAAVDAVKAKVFGDLLPAEGEAKFPKDLVAEVF
HDLQAKVVRWNILDNGIRIDGRDVKTVRPILAEVGILPRAHGSALFTRGETQALVVATLG
TGEDEQLIDNLEGTYRERFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPMLPT
PAEFPYTIRVVSEITESNGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGERYAV
LSDILGDEDHLGDMDFKVAGTEEGITSLQMDIKITGINEEIMRVALGQAKEGRLHILGEM
AKAITGARAELGEFAPRIETLRIPTEKIREVIGTGGKVIREICEKTGAKINIEDDGTVKV
ASSDGNSIKAAINWIKSIATDPEVGHIYDGTVVKVVDFGAFVNFFGSKDGLVHISQLAKG
RVAKTSDVVKEGDKVKVKLLGFDDRGKVRLSMRLVDQETGEDLEGKEPPQAEAGE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgttcgagattcatcgcgaggaaatcgagtgggccgggcgcaagctcgtgctg
gagacaggcaagatcgcccgccaggcggacggtgccattttcgcgacttatggggaaacc
acggtgctggccaccgtcgtctccgccaaatcggtcaagccgggagtcgatttctttccg
ctgaccgtgaattatcaggaaaaagctttcgccgcgggccggattcccggcggttatttc
aagcgcgaaggccgcccctcggagcgggagacattggtttcccgcctgatcgaccggccg
atccgtcccctctttcccgagggatatcggaacgagacgcaggtgatcgtgaccgtgctc
gcccatgatctcgagaacgatcccgatattctttccatggtcgcgagctcggcggccttg
acgctctcgggcgttcccttcatgggtccggtgggcgctgcccgtgtcgcctatgtgaac
ggtcaatataagatcaatccaacccttgatgaggtaaaggatacggcgctcgatctcgtt
gtcgccggcaccagcgatgccgtgctgatggtcgaatcggaggccaaggaattatccgag
gacgtcatgctcggtgccgtcatggcgggccatagctccttccagccggtcatcgatgcg
atcattcggctcgccgagaaggcagccaaggagccgcgcgatctgatcctgcccgataag
accgaggtcgaggtggcagtgcttgcgattgccgagaatgatctccgcgaagcctataaa
atcacctccaagcaggatcgctatgcggcggtcgatgcggtgaaggcaaaggtcttcggg
gatctgctgccggccgagggcgaggcgaaatttcccaaggatctcgtcgccgaggtgttc
cacgatcttcaggccaaggtcgtgcgctggaacattctcgataatggtattcgcatcgac
gggcgtgatgtgaaaaccgtgcgtccgatcctggcggaggttggcattctgccgcgtgct
cacggctcggctttgttcacacgcggtgagacccaggcgcttgtcgtcgcgacgctcggg
accggcgaggacgagcaattgatcgacaatctggagggcacctatcgggagcgcttcctg
ctgcattataatttcccgccctattcggtcggtgaggcgggccgtatgggctcgcctgga
cgccgcgagatcggccatggcaagctcgcctggcgcgcaatccatccgatgctgccgacg
ccggcagaattcccttatacgatccgcgtcgtttcggagattaccgaatccaatggttcg
tcctccatggccacggtctgcggctcctctttggctttgatggatgccggcgtgcccttg
aagcgcccgacggcaggcattgccatgggtctgatccttgaaggcgagcgttatgcggtc
ctgtccgatattctcggcgacgaggatcatctgggcgacatggatttcaaggtcgccggc
accgaggagggcattacctcgttgcagatggacatcaagatcacgggcatcaacgaagag
atcatgcgggtggcgctgggccaggccaaggaaggccgcctgcatattctcggcgaaatg
gccaaggctatcacgggggcgagagcagaactcggcgaattcgcgccccgcatcgagacc
ctgcgcattccgaccgaaaagatccgggaagtcatcggtacgggcggcaaggttatccgt
gagatctgcgagaaaaccggtgccaagatcaatatcgaggatgacggtacggtgaaggtc
gcctcctccgacggtaattcgatcaaggcggcgatcaattggatcaagtcgatcgccacc
gatccggaagttggccatatttacgacggcacggtggtcaaggtcgtcgatttcggcgcc
ttcgtgaatttcttcggctcgaaggacggcctcgtgcatatttcgcagctcgcgaagggg
cgcgtggcgaaaacctccgatgtcgtcaaggaaggcgataaggtgaaggtcaagctgctc
ggattcgatgatcgcggcaaggtgcgcctgtccatgcgtctcgtcgatcaggaaaccggc
gaggatctcgaaggcaaggagccgccgcaagccgaagctggcgaataa
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