Beijerinckia indica: Bind_3746
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Entry
Bind_3746 CDS
T00688
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bid
Beijerinckia indica
Pathway
bid03420
Nucleotide excision repair
bid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bind_3746
03430 Mismatch repair
Bind_3746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bid03400
]
Bind_3746
Enzymes [BR:
bid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bind_3746
DNA repair and recombination proteins [BR:
bid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bind_3746
MMR (mismatch excision repair)
Other MMR factors
Bind_3746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACB97296
UniProt:
B2IL96
LinkDB
All DBs
Position
pBIND01:complement(59506..61698)
Genome browser
AA seq
730 aa
AA seq
DB search
MKTSTISTAPSPCFLSTASLPASSSQFMDGIAMSNEFDHYDPDAYASFMDDRPMYAPSSE
AFTVLTQGLTPRQIEAASAPGAVVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTF
TNKAASEMSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRL
IKRIMQSLNLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQKKIAEANAIGE
PIHPASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRDAAYRTRWARRFDCILAD
EYQDVNYAQYQWLRALAFEHHRIFCVGDDDQAIYGWRGADITYIRRFTQDFPQASVIRLE
ENFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVVAYRYCDGEAHGIVEEIKKR
HAEGVDFAEMAILYRNNFFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTLAFLRIATT
PDDRQSDEALRRVINEPRRGFGKKAMAILEEEANFRHLSLFRAIETATLSSACRKAGLMF
VAAIEKVAKDPSLTLADQLSLLLDATGYRAMLQASKAEDGKARLENISELLHLAGSFHDA
HELLDHAALASSRPNENEEGRLKLMTLHKSKGLEFEHVFLPGWEDGIFPAGNSDLDEERR
LAYVAITRAKRRAAITYCEYRRGLADPSSFIADIPPQHRIEGWLRDDGLPPVQRERKANA
WHNPRRARSF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtcgacgatttcgaccgcgccttcaccctgttttctctcgactgcgagcctg
ccggcgagctcctcacaatttatggatggaattgccatgtcgaacgagtttgatcattac
gatcccgacgcttatgcgtctttcatggacgatcggccgatgtatgccccgtcctccgaa
gctttcacggtcctgacacagggcttgacgccccggcagatcgaagccgcttccgcccct
ggcgcggtcgtcgtgctggctggcgcgggcaccggcaagacctcgacgctcacctgcgcc
gtggttcatcgcatcgccgtggaaggcctttctgcgtcccgcatcctggccgtgaccttc
accaataaagcggcatccgagatgagcgacaggatccgcgcggccctgcagggtggcagt
accccatcctggcttggcactttccatggacttggcgcccgccagctgcgggcagaacca
gaagtcgcgggcctgcgccccaatttcgagatcctcgacgccgatgacagccggcgcctc
atcaagaggatcatgcagtccctcaacctgaacacggatgagcaggacaatgaatccggc
cccgagccgatcaaacggatgatcaaccagatcagcaagttcaaggaccttcttctgtca
ccggacgaggcgcctgcctatgtccagaagaagattgccgaggccaatgcaatcggagag
ccgatccatccggcgagcctcttcaacgccgccaggatctatgctctctatcagcagcgt
ttacgcgaccagaacagcgctgatttcggcgatctgttgctttggccgacgcgcgcgctc
ctgcgtgatgccgcctatcgcacccgttgggcgcgccgtttcgattgcatcctcgccgac
gaatatcaggacgtcaattacgcccaatatcaatggctgcgcgcgctcgcctttgaacat
caccgcatcttctgtgtcggcgatgatgaccaggcgatctatggctggcgcggcgcggac
atcacctatatccgccgcttcacccaggattttccgcaggcctcggtgatccgcctcgag
gagaatttccgctcgaccggagctattttggcatccgccaatgccgtgatcgcccgtgat
ccgcaccggctgggcaagaccctcttcaccaacaaaggctatggccagccaattgaggtc
gtggcctaccgttattgcgatggcgaagcccatggcatcgtcgaggaaatcaagaaacgg
catgccgaaggcgtcgatttcgccgaaatggcaatcctctaccgcaacaatttcttctcg
cgcggcttcgaggagtgtctcgtgcgggccaagattccctatgtcatcgtcggcgatgtc
ggcttctaccagcgcgccgagatcaaggacactctggccttcctgcggatcgccacgacg
cccgatgaccgccaatcggatgaagccttgcggcgcgtcatcaacgagccgcggcgcggt
ttcggcaagaaggccatggccattctcgaggaagaagccaatttccggcatctgtcgctg
ttccgggcgatcgagaccgccactctctcatccgcctgccgcaaggccggtttgatgttc
gtcgcggcgatcgaaaaggtcgcgaaggatccaagcctgacgctcgccgaccagctctcc
ctgctgctcgatgcaaccggctatcgcgccatgctgcaagccagcaaggctgaagacggt
aaagcccgcctcgagaatatcagcgagctcctgcatctggccggcagcttccacgacgcg
catgagctcctcgaccatgcggctctcgcaagcagccggccaaacgagaacgaggaaggc
cgtctcaagctgatgaccctccataagtcgaaaggcctggaattcgagcatgtctttcta
ccgggctgggaggacggcattttcccggctggcaacagcgatctcgatgaggaacgccgc
ctcgcctatgtggcgatcacaagggcgaaacgccgcgcggcgatcacctactgcgaatac
cggcgcggcttggccgatccttcgagcttcatcgccgatattccgccgcagcatcggatc
gagggctggctgcgcgatgacggcctgcctcccgtgcagcgcgaaaggaaggccaatgcc
tggcacaacccgcgccgtgcccgctccttctaa
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