Bengtsoniella intestinalis: RFF05_00960
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Entry
RFF05_00960 CDS
T10691
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie00300
Lysine biosynthesis
bie00470
D-Amino acid metabolism
bie01100
Metabolic pathways
bie01110
Biosynthesis of secondary metabolites
bie01120
Microbial metabolism in diverse environments
bie01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RFF05_00960
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RFF05_00960
Enzymes [BR:
bie01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RFF05_00960
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XAY15886
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Position
complement(188391..189611)
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AA seq
406 aa
AA seq
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MDNTALRQLAQQHPSFYLYDQAAIVSAIATLKTNFPTVDFLYSAKTNPHDKVVETIATQG
FGIDAASVAEVMLGVQNGVPKEKIQFSAPGKTMENLADTVDHAIIIADSFHELDQLHQLA
QERNTVLNIGIRINPNFGFDGGASCSKFGIDQDQLFAQLPTLLQQEHLNIVGLHCHLRSQ
SLDVDLLHQYHKNLLALALEFQTALGHPLQFLNMGSGIGIPYGTTDTEVDVAALGAVTTA
ALTALQSALPQTKFYIETGRYVVGKAGVYVTRVLDKKVSHGTTMIILCNTLNGFIRPSIE
QMVTGYTTQDSPHNSEPLFTSKGAFQFTALTDSITFETVTLMGNLCTAMDVMAKNLTLPT
LEIGDSVMVNNAGSYAAVLSPVQFSSQQKPVELFLTSHGQILTPFH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggataacacggctctgcgccaactggcgcaacaacaccctagtttctatctctatgac
caagccgccattgtgtcggccatcgccactttaaaaaccaactttcccacggtagacttt
ctctattccgccaaaaccaatccccatgacaaggtggtagaaaccattgccacccaaggc
tttggcatcgatgccgccagcgtggcagaggtgatgctaggggtgcaaaacggcgtaccc
aaggaaaaaatccaattctccgcacccggaaaaaccatggaaaacctagccgacaccgtt
gaccatgccatcatcattgccgatagctttcacgaacttgaccagctgcatcaattggcg
caagaacgcaacaccgtgctaaacattggcatccgcatcaatcctaattttggatttgat
ggcggtgcatcctgctccaaattcggcattgaccaagatcagctctttgcccagttgcct
accctgcttcaacaggagcatctgaacattgtgggcttgcattgtcacctacgaagccaa
tctttagatgtagacttactgcatcaataccacaaaaatctgctagctttggcgctggag
ttccaaaccgcactggggcatcccctccaatttttaaacatgggctctggcatcggcatc
ccatatggcaccactgacacagaggtggatgtagccgcattgggtgccgtcacaaccgcc
gccttgaccgccctacaatctgccttaccacaaaccaaattctacatagaaacaggacgc
tatgtggtgggcaaagctggggtatacgtcacccgcgtgctagacaaaaaagtgtcacac
ggcaccaccatgattatcctttgcaacaccttaaatggctttatccgccctagcatcgag
caaatggtcacgggttataccacccaagatagccctcacaacagcgaaccactgttcacc
tccaaaggcgccttccaattcactgccctcactgattccatcacatttgaaaccgtgaca
ttgatgggaaacctttgcacagcaatggatgtaatggcaaaaaacttaacactaccaaca
ctggaaatcggggatagcgtcatggtcaacaatgctggtagctatgccgctgtcctgtct
cccgtacaattttcttcccaacaaaagccagtggaactgtttttaaccagccacgggcaa
atactcaccccatttcattaa
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