Bengtsoniella intestinalis: RFF05_02000
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Entry
RFF05_02000 CDS
T10691
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RFF05_02000 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bie03400
]
RFF05_02000 (priA)
Enzymes [BR:
bie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RFF05_02000 (priA)
DNA repair and recombination proteins [BR:
bie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RFF05_02000 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
PriA_C
ResIII
Zn_ribbon_PriA
Zn_ribbon_6
PIF1
AAA_30
TrwB_AAD_bind
nSTAND_NTPase5
Zeta_toxin
SLFN-g3_helicase
DUF3638
Motif
Other DBs
NCBI-ProteinID:
XAY16085
LinkDB
All DBs
Position
complement(389634..392081)
Genome browser
AA seq
815 aa
AA seq
DB search
METVDIVKVAVETAPYAIDKVYDYLLPETLCDQVVVGMRVMVPFGRGNRKSEALVLARTT
GEKTPKMKAILQVLDEAPVLDGKGISLALWMHQRYFTTVYQAAKTQLPAGLWYRMEEVYQ
VAPEVEDLEALTLPEPAIALLKVMKKEGRLSCQAVCARCGADGEGYLPLLVEKKLVVKAT
QAHRKHRDKTQKVVSLAMDDESAMALVAGKKRSAPMRFAVVEFLIAAGRSAITDVTYFTG
ASLATVKGLEKSGIVTLSQEEVLRVPEVTASVQGAPIALNEEQQHSFDQLLVLTQKEEPQ
VALLQGVTGSGKTQVYIRLVQAVLAQGKQAMMLVPEIVLTPQMMGKFASYFGNRVAMLHS
GLRTTERYDQWKRIRRGEVDVVLGTRSAVFAPLERLGLVILDEEQEGSYQSDSAPRYHAR
DIAKYRCTQYGATLVLGSATPLVETAYAAQQGQYHHYYLTQRYNQKPLPEVLFADMRQEL
RNGNSGAISGLLRTELEKNIQAGEQSILFLNRRGSSRMLLCVECGQSPQCPHCSVALVHH
TANGRMMCHHCGYSEKASMYCPDCHGMMKQVGYGTQKVEEELQALFPDVEVLRMDADTTA
TGHEKILKQFGDEKTPILLGTQMVAKGLDFANVTLVGVLSADLSLYVDHYRATERTFHLL
TQVVGRAGRGELTGRGIIQTFTPENDVMIHAAHQDYQGFYQTELTLRQLRRSPPFADIFT
FTVSGGEEGAVLKGACTVRDTLKQVLSHPELEGIAPQVLGPAPAPILKVNNRYRYRVTLV
AKNVTPIRQRISWLLREFPSTHRGLNLFVDCNNMS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgtagatattgtaaaagttgcggtggaaactgcaccctatgccattgataag
gtgtatgattacctgttgccagagactctttgcgaccaagttgtagtgggtatgcgtgtg
atggtgccctttggccgtggaaaccgaaaaagtgaagccttggttttggcacggacaaca
ggggagaaaaccccgaaaatgaaagcgattttacaagtgttggatgaagcgcctgtgcta
gatgggaaagggatttctctggcactgtggatgcaccagcggtattttaccacggtgtat
caagcggctaaaacccaactgccagcaggtttgtggtatcggatggaagaggtgtaccaa
gtggctccagaggtggaggatttggaagctttgacactaccagagccagccattgcgttg
ctaaaagtaatgaaaaaagaaggccgcctgagctgtcaggcggtttgcgcacgctgtggg
gcagacggagagggctatttgcccttgttggtcgaaaaaaaactggtggtaaaagccacc
caagcccaccgcaaacaccgagacaaaacccaaaaagtggtgtctcttgccatggatgat
gaaagtgctatggcgttggtggcaggtaaaaaacgctcagcccctatgcgctttgcggtg
gtggaatttctcatcgccgctggcagaagtgccatcaccgacgtgacctattttacaggc
gcatcgctggcaacggtgaaaggcttggaaaagtctggcatcgtgaccctgtcacaagaa
gaggtgctccgtgtgccagaggtgacggcttctgtccaaggtgcacccatcgcattaaat
gaggagcaacagcactcttttgaccaactgttggtgctcacgcaaaaagaagaaccccaa
gtagcattgctgcaaggggtgactggtagcggtaaaacccaagtgtatatccgcttggta
caagcagtgcttgcacagggtaaacaagcgatgatgttggtgccagaaatcgtattaacg
ccccaaatgatggggaaattcgccagctatttcggcaaccgtgtggcgatgcttcacagc
ggattgcgcaccactgagcgctatgaccagtggaagcggattcgtcgtggggaagtggat
gtggtgttgggcacgcgctcggctgtgtttgcaccgctggagcggttggggctagtgatt
ttagatgaagagcaagaaggctcgtatcagtcagacagtgcccctcgttatcacgcccgt
gacattgcaaaatatcgttgcacccagtatggtgctaccttggtgttgggcagtgccacc
cctttggtggaaaccgcctatgccgcccagcaaggccagtatcaccactattatttgacc
cagcgatacaaccaaaagcccctgccagaggtgctctttgccgatatgcgccaagaattg
cgcaacggcaacagcggtgccatcagtggcttactgcgtactgaattggagaaaaatatc
caagcaggggagcaatctattttgtttttgaaccgccgtggtagcagtcgaatgctactg
tgcgtggaatgtggacaaagcccacaatgcccccattgttcggtggcactggtgcaccat
actgccaacgggcggatgatgtgccaccattgtggctactcagaaaaagcgtctatgtac
tgcccagactgccacggcatgatgaagcaggtgggctatggcacccaaaaggtggaagag
gagctgcaagccctgttccctgatgtggaggtactgcgcatggatgcagacaccaccgcc
acaggccatgaaaaaatccttaaacagttcggggatgaaaaaacccctattctccttgga
acgcaaatggtggcaaaagggcttgattttgcgaatgtaacccttgttggcgtactttct
gccgatttatctttgtatgttgaccattaccgcgccacggaacgcaccttccatttgttg
acccaagtggtggggcgagcaggccgcggtgaactcacagggcgtgggataattcaaacc
tttacccctgaaaatgatgtgatgatacacgctgcccaccaagattaccaagggttttac
caaaccgaattaacattacgacaattgcggcgcagtccaccctttgccgacatctttacc
ttcaccgtttctggtggagaagaaggagcggtgttaaaaggggcttgtaccgtgcgagat
acattaaaacaagtactcagccatccggaattggagggcattgctccacaggtgttaggg
ccagccccagcacccattttaaaagtcaacaaccgttaccgttatcgggtcacattggtg
gcaaaaaacgtaacccccattcgccagcgcatcagctggttactgcgagaattcccctca
acacaccgaggtttaaatttatttgtagactgtaacaatatgagttaa
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