Bengtsoniella intestinalis: RFF05_02855
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Entry
RFF05_02855 CDS
T10691
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
bie Bengtsoniella intestinalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
AAA_5
AAA
PAS_8
HTH_50
PAS_9
HTH_8
PAS_4
Mg_chelatase
AAA_2
LSM14
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XAY16248
LinkDB
All DBs
Position
567004..568422
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AA seq
472 aa
AA seq
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MEETLALMKTHGQALLQGDPALVFQRFAAILDSIHDGVYITDGNAVTLFANKTYCDISGL
NRSDVLGLSMQEMIERGLIDRSGSLLAIKHSKEVTLTQVFSTGKRAKITSYPYCESDNVI
SMIITVVQDITDLYNLEVKYQHSQESRRTEIQFRNRHDFSGQRIIAYDHNSLATLGRVER
VASLDTTVLLVGETGVGKEQFARYIVENSPRADQPFITINCGAISPSLIESELFGYGRGA
FTGANREGKMGVFESANHGTLFLDEIGELPLNMQVHLLRVLQEMKVRRIATNKDVDVDVR
IIAATNRNLMEMVQEKTFRKDLYYRLTVVPISIPPLRERTGDIAPLLDFFLADVNKKYRM
EKTVSKDALTLLHQYSWPGNIRELKNVVEQAVILSTGDLITPQDIPILYQRQIKPTFQEG
MCLKEAVAQFEYEYICAAYEKHGNVRAAAASLQMDSATFVRKRKKYADLLQK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaccctagcgctgatgaaaacccatggccaagcgttgttacaaggtgatccc
gcccttgtttttcagcgctttgcagccattttagatagcattcatgacggggtgtatatc
accgacggcaatgccgtcaccctgtttgccaacaagacctactgtgatatttcaggttta
aaccgctctgatgtattggggctttctatgcaggaaatgattgagcgtggcctcattgac
cgctctgggtctttattggccatcaagcacagcaaagaagtgaccctcacccaagttttt
agcacaggcaaacgggctaaaatcaccagctatccctattgcgaatctgacaatgtcatc
tccatgatcatcacagtcgtacaagatattacggatttatacaacttagaagtaaaatat
cagcacagtcaagaaagccgtcgcacagagatacaatttagaaaccgtcacgatttctct
ggtcaacgcatcatcgcctatgaccataattcccttgccacactgggtcgtgtagaacgg
gtggcctccttggacaccactgttttattggtgggggaaactggcgtaggtaaagaacag
tttgcacgctacatcgtggaaaattcccctcgcgccgaccaaccttttatcaccatcaac
tgcggtgccatctccccttcactgattgaaagcgagctcttcggctatggccgtggtgcc
ttcaccggtgccaatcgtgagggtaaaatgggtgtgtttgaaagcgccaaccatggtacc
ctctttttagatgaaatcggcgagctccccttaaatatgcaggtacatctgttgcgcgtt
ttgcaggagatgaaagtgcgacgcattgccaccaacaaagatgtggatgtggatgtgcgc
atcatcgccgccaccaatcgcaatttaatggaaatggtgcaggaaaaaaccttccgcaag
gacttgtattatcggctcaccgtggtgcctatttccatcccgcctctacgggagcgcaca
ggtgatatcgcgccccttctagacttttttctggcagatgtcaataaaaaatatcgcatg
gagaaaaccgtttctaaggatgccttgaccttacttcatcaatacagttggcccggtaat
atccgtgaattgaaaaacgtggtggaacaggccgtcattttaagcacaggagacctcatc
accccacaagacatccccatcttgtatcagcgccaaatcaagcccacctttcaagaggga
atgtgcctaaaagaagctgtggctcagtttgaatatgaatatatctgcgccgcctatgaa
aagcacggcaatgtccgtgccgctgctgccagtttacagatggatagcgccacttttgta
cgcaaacggaagaaatatgcagatttgttgcaaaaatga
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