KEGG   Bengtsoniella intestinalis: RFF05_04265
Entry
RFF05_04265       CDS       T10691                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bie  Bengtsoniella intestinalis
Pathway
bie03030  DNA replication
bie03430  Mismatch repair
bie03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RFF05_04265 (dnaX)
   03430 Mismatch repair
    RFF05_04265 (dnaX)
   03440 Homologous recombination
    RFF05_04265 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bie03032]
    RFF05_04265 (dnaX)
   03400 DNA repair and recombination proteins [BR:bie03400]
    RFF05_04265 (dnaX)
Enzymes [BR:bie01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RFF05_04265 (dnaX)
DNA replication proteins [BR:bie03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RFF05_04265 (dnaX)
DNA repair and recombination proteins [BR:bie03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RFF05_04265 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNAX_ATPase_lid AAA_22 RuvB_N AAA_30 AAA_5 TIP49 AAA_19 AAA_18 Rad17 Mg_chelatase Sigma54_activ_2 Herpes_Helicase DNA_pol3_delta_C AAA_14 AAA_7 DUF815 AAA_16 AAA_28 TsaE AAA_24
Other DBs
NCBI-ProteinID: XAY16505
LinkDB
Position
853764..855488
AA seq 574 aa
MYQALYRKWRPKSFADVVGQAHITQTLQAQIAQGRLSHAYLFTGTRGTGKTTCAKILSKA
VNCQSPVDGNPCNQCESCLGIENGGYLDVLELDAASNNGVDHVRALRDEAVYAPASVRYR
VYIVDEVHMLSTAAFNALLKILEEPPAHLIFILATTELHKVPATILSRCQRFSFKRILPL
DVQRRLLEVARGESIPLCADGAEVLARLSDGALRDALSLLDQCASVDGDITAQAVLDVLG
LAGNLATINMMEAILDRDSDQALSLLHQLYQDGKEVGAVLGELSSLCRDLLLRKAAPKGG
DALLSGGFDAATLSRLGQGIPTARLLYLSQTVQSALGQLHQCPNRRLEAELCILKLCDES
LGWDATAVEARLVRLEQGGIVAQAAPKVTKVAPVAPAPVAPAPVAPAPVAPAPAPVVDAL
PWDDDDRPPLSEEPPMMDAPPWDEPPFEPAPSVTPIAPTPVTPTPAPTPAPTPVAPTASG
GVQRGAWWRGVAERCKGQLPPMYRAFMDLCEGVLDGDTLVLYANNDVTVGRLDNDRVRGI
IMQEITGDGGTRILIQAGDPPKEKLNPKQTYKTC
NT seq 1725 nt   +upstreamnt  +downstreamnt
gtgtatcaagcgctctatcgtaaatggcgtcccaagtcctttgccgatgtggtgggacaa
gcgcacatcacccaaaccttgcaagcccaaattgcccaaggccgattgtcccacgcctat
ctattcaccggcacccgtggcacagggaaaactacctgcgccaaaattctttccaaggct
gtcaactgccaatcccctgtggacggcaacccttgcaaccaatgcgagtcttgccttggc
atcgaaaatggcggttatttagatgtattagaactggacgccgcctctaacaacggtgtt
gaccatgtccgtgccttgcgagatgaagccgtgtatgccccagccagtgtgcgctatcgg
gtttacattgtggacgaagtacatatgctatccacagcggcattcaatgccctgttgaaa
attttagaagaaccccctgcccacctgatttttattctggccaccactgagttacacaag
gtgccagccactatattgtctcggtgtcaacggttttccttcaaacggattttacccctt
gatgtgcaacgccgtttgctagaagtggcccgtggcgagtccattcccctgtgcgccgac
ggtgcagaagtgttggcgcggttatccgatggcgctttgcgcgatgccctgtccttgctg
gatcaatgcgccagcgtagatggcgatatcactgcccaagccgttttggatgtgctaggt
ttggctggcaatcttgccaccatcaacatgatggaagccattttagaccgtgacagcgac
caagccctctccttgctccaccagctgtatcaagacggcaaggaagtaggtgctgtgctg
ggtgaactctccagcttatgccgtgatttactgttgcgcaaagccgctcccaaaggtggt
gatgcgttgctctctggcggttttgatgccgcaaccctgtctcgtttgggacaaggcatc
cccactgcacgactgctctatttatcccaaacggtacaatccgccttgggtcaacttcac
caatgccccaaccgccgcttagaagcagagctttgcattttaaaactctgtgacgaaagc
cttggctgggatgcaaccgctgtggaagcccgtcttgtccgcttagagcaaggtggcatt
gtggctcaggctgctccaaaagtgactaaggtggcacctgtggcaccagcacctgtagcg
cctgcacctgtggcaccagcacctgtagcgcctgcacctgcccctgtggtagacgcctta
ccttgggacgacgatgatcggccacctttatctgaggaaccacccatgatggacgcacct
ccatgggatgaacctccattcgaaccagcgccgtctgtgacacctatcgcacctacaccc
gtaacgcctacacctgctcctacacctgctcctacacctgtagcgccaaccgccagcggc
ggcgtacagcgtggcgcatggtggcgtggcgtggcagagcgttgcaaaggccaactcccc
cccatgtaccgcgccttcatggatttgtgcgaaggggtattggacggcgacaccttggtg
ttgtacgccaacaatgacgtcactgtagggcgactggacaacgaccgtgtccgtggcatc
atcatgcaagaaatcactggcgacggtggcacacggattctcatccaagctggcgatccc
cccaaggagaaattaaaccccaagcaaacctacaaaacctgttaa

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