Bengtsoniella intestinalis: RFF05_04310
Help
Entry
RFF05_04310 CDS
T10691
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
bie Bengtsoniella intestinalis
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bie03009
]
RFF05_04310
Enzymes [BR:
bie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RFF05_04310
Ribosome biogenesis [BR:
bie03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RFF05_04310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
XAY16514
LinkDB
All DBs
Position
complement(863158..863877)
Genome browser
AA seq
239 aa
AA seq
DB search
MEKQRLDKLIAATGQYSRRDVKALVRQGRVLIDDKIAAAPEDKYDGDAVEIKVDGKVIAC
ERFTWLMLNKPAGYLSATEDGQGETVLDLLPAHYQKQGLFPVGRLDKDTEGLLLLTNDGQ
MAHRLLSPRHHVDKRYFAKVDGILEPADCQAFSNGMTLGDGLQCMAAKLEILEEFEKKAC
FVTLQEGKFHQVKRMLACCGKPVTYLQRVAMGGLKLDENLALGAFRPLTKTELTMLERQ
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacagcgtttagataagctcatcgccgccacaggccagtattctcgccgagat
gtgaaggcattggtgcgtcaaggccgtgtgttgattgacgataaaattgccgccgcgcca
gaggacaagtatgatggggatgcagtggaaatcaaggtggacggcaaggtgatcgcctgt
gagcggttcacgtggctcatgctcaacaagccagctggctacctttctgccacggaagat
ggacagggggaaactgtgctggatttactgccagcccactaccaaaagcaagggttgttc
cctgtgggacggctggacaaagacacagaaggcctgttgctgttgaccaacgatggtcag
atggcacatcgtctgctctcgccacgtcaccatgtggataagcgatattttgcaaaggtt
gacgggattttagagccagcagattgtcaggctttctccaacggcatgacactgggcgat
gggctacaatgtatggctgcaaagttggaaatattggaagaatttgagaaaaaagcctgt
tttgtcacgttgcaagaaggtaaattccatcaagtaaagcggatgttggcctgctgtggg
aaacctgttacttatttacaaagggttgcgatgggtgggttgaaattagatgaaaaccta
gctttaggggcatttcgtccccttacaaagacagaattaacaatgctagaacggcagtaa
DBGET
integrated database retrieval system
