Bengtsoniella intestinalis: RFF05_05010
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Entry
RFF05_05010 CDS
T10691
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RFF05_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bie03400
]
RFF05_05010
Enzymes [BR:
bie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RFF05_05010
DNA repair and recombination proteins [BR:
bie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RFF05_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
OB_YrrC
UvrD-helicase
UvrD_C
HVO_0513_N
PIF1
AAA_12
DEAD
HHH
Motif
Other DBs
NCBI-ProteinID:
XAY16644
LinkDB
All DBs
Position
complement(1018913..1021078)
Genome browser
AA seq
721 aa
AA seq
DB search
MRCKFQRVIYPKDGTTSDNGFMIVLYRPLDRVPDAHGEPMDAIKAVGYYLPTAEDIDYDL
QGQWTRGKHGIQYQVDTYEELVPPTREGIVRYLASGLIKGIGQKTAERIFDTFGAQTLQV
LDDTPERLIEIRGISQTKLEKIKTSLIESHGARNIIALLAPHGVTPNCAVRIFTQYGADA
TKIVREHPFRLCHIHGFGFKTADKIAQALGLDPTSPDRVDAGILYVLEDEESTGNLCLNK
GLLMKKALALLDTEALSQKMLATRAYALLQEGEITLYGDDAYRKSTAKAEEDVARCVTEL
LQSCSQMGRAEIQKEIVLAEARIGFTLAAEQQEAVITSLAAGLSIISGGPGTGKTSIQKF
ILDIYHTLYPEGKIICCAPTGRAARRMQESTGYHSTTIHKALGLLAGEDGSYNEPEMLDA
DLIVVDEVSMVDIYLARNLLLSTPPGAKLVLIGDADQLPSVGPGAVLSELIRSGCIPLVK
LDKIYRQAIGSRIPVNASIIRHNATHLEYGDDFRLIESKSFTESAEIIQRIYVEEANRYG
AENVLVLSPYRGKTETGVNEINGRLQGLANPPAPDKAEIQSGRLRLRINDRVMQMQNQGD
INNGDVGLIRAIHFDRDEVVAEMDFGDGRVVEYDATQLKSLDLAYASTVHKSQGSEYTSV
ILSLQTGHYPMLKRPLLYTAITRAKRRVTIVGERRALCMAIKTVDAEKRNTNLANRIKER
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtaaattccaacgagtcatctatcccaaagatggcaccacatcggacaatggc
tttatgattgtgctctatcgtccgctagatcgtgtaccagatgcccacggtgagccaatg
gatgcaatcaaagcggtcggttattatctgcccacagcggaagatattgactatgacctg
caggggcagtggacacgtggaaagcatggtatccaatatcaagtggatacctatgaagaa
ctggttccccccacacgggaagggattgtccgctatctcgcatctggactgattaagggg
attggacagaaaacggctgagcgcatcttcgatacctttggggcacaaaccctacaggtg
ttggatgatacgccagaacggttgatagaaattcgtggtatcagccagacgaaactggaa
aaaatcaaaacctctctcattgaaagccatggtgcccgcaatatcattgccttacttgcc
ccccacggagtcaccccaaactgcgctgttcgcatttttacccagtatggagccgacgca
acgaagattgtgcgagaacacccattcaggctctgccatatccatggatttgggtttaag
accgcagataagattgcacaggcgttgggcttagacccaacgtccccagaccgtgtggat
gcaggtatcctctatgtattagaggatgaggaaagcacaggcaatctgtgcttgaacaaa
gggctactgatgaagaaagccctcgcactactggatacagaagcactatcccaaaagatg
ctggcaacaagagcctatgccttattacaggaaggagaaatcacgctgtatggcgatgat
gcctatcggaaatccactgcgaaggcagaggaggatgttgctagatgtgtcacagaattg
ctccaatcctgttctcaaatgggtagggcagaaattcaaaaagaaatcgtgttggcggaa
gcacgcatcggttttaccctggctgcagaacagcaagaagcggtgattaccagtctggcc
gctgggctgagcattatttctggtggcccaggcacaggcaagacctctatccagaagttc
attctggacatctaccacaccctctacccagagggtaaaatcatttgctgtgctccaaca
gggcgtgccgcccgacgcatgcaagagtccacgggctatcatagcaccacaatccataag
gcattggggctattggctggtgaagacggtagctacaacgagccagaaatgttagatgct
gacctcattgttgtagatgaggtatctatggtggatatctatctggcgcggaacctgctg
ttatccacaccgccaggagcgaagctggtactcatcggcgatgctgaccagcttccatct
gttggcccaggtgcggtgctcagcgaactcattcgcagtgggtgtatcccactggtcaag
ctagataaaatctatcgacaagccattggaagtcgcatcccggtcaacgcatccatcatt
cgccataatgccacccacttggaatacggcgatgatttccgcctcatcgaaagcaaatca
tttactgaatcggccgaaattatacaacgcatctacgtggaggaggcaaatcggtatggg
gcagaaaatgttctcgtcctctcaccctatcgtggaaaaactgagacgggggtcaatgaa
atcaatgggcgattacaaggacttgccaatccaccagccccagacaaagcagaaatccag
tctggtagattacgcttacgcatcaacgatcgtgtgatgcaaatgcaaaaccaaggtgat
atcaacaacggcgatgtggggctcattcgtgccattcatttcgatagagatgaagtggtt
gctgaaatggactttggtgatggcagggttgtggagtatgatgccacacagctgaaatca
cttgatttggcctacgcaagtaccgtccataagtcccaaggttctgagtacacctcagtg
atcttatccctacagacagggcattaccccatgttaaaacgtccactgctctatacggcc
atcacccgagcaaagcgccgtgtgaccattgtgggtgaacggcgtgcgctctgtatggca
atcaaaacagttgacgctgaaaagcgtaataccaatctggccaatcgaatcaaagaacgc
cagtaa
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