Bengtsoniella intestinalis: RFF05_07715
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Entry
RFF05_07715 CDS
T10691
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bie Bengtsoniella intestinalis
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bie03009
]
RFF05_07715 (rimO)
Enzymes [BR:
bie01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RFF05_07715 (rimO)
Ribosome biogenesis [BR:
bie03009
]
Prokaryotic type
ribosomal protein modification factors
RFF05_07715 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
NAGidase
Motif
Other DBs
NCBI-ProteinID:
XAY17159
LinkDB
All DBs
Position
complement(1580393..1581712)
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AA seq
439 aa
AA seq
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MNYNVSFISLGCAKNQVNCEQMMARTRDAGHTLMPTPYGSDVVVVNTCGFIDSAKEEAIA
NVLEMGKLKLEGQVKKILVTGCMAQRYKDEIMEALPEVDGILGTGNYADIARAVDEVMHQ
GKPTWFSSIHAPEDEYDRVLTTPSWYAYLRIAEGCDNHCAFCVIPSLRGKYRSRPMDNVV
AEAQKLSDSGVKECIVVAQDITRYGMDWDGKRHLADLLKELCKMDFHWIRLHYLYPDEIT
PELIEVMAQEEKILPYLDLPIQHCNDTVLTAMNRRGNKAYLLDLFPKLKEALPGLVVRTS
LITGLPGEDEEAFEELCDFLREVNLQRVGVFPFSPQEGTPAEKMERVEFEEAVRRADLLV
DVQSRIMDDYNESALGEEREILCEGFDSQTQMYFGRSYAESPDIDGRVHFEAEGEVEPGT
FVMVQITDTMDGELTGKMV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgaactataacgtatcctttatttcccttggctgtgccaagaatcaagtcaactgcgag
cagatgatggcgcgcacccgtgacgcaggtcacaccctgatgcccaccccctacggtagc
gacgtggtggtggtgaacacctgtggtttcatcgacagcgccaaagaagaagccattgcc
aatgtactggaaatgggcaaactgaagctagaaggtcaagtgaagaaaattctggtgaca
ggctgtatggcacagcgctacaaagatgaaattatggaagcgcttcctgaagtagacggc
attttgggcacaggcaactatgctgacattgcccgtgctgtggacgaagtgatgcaccaa
ggcaagcccacgtggttttcctccattcatgcccctgaggacgaatatgaccgtgtgctc
accaccccttcttggtatgcctatttgcggattgcagaaggctgtgacaaccattgcgcc
ttttgcgtgattccatctctgcgtggcaaatatcgttctcgccccatggacaatgtggtg
gcggaagcccaaaaactatccgattctggagtgaaagagtgcatcgtggtggcgcaggat
atcacccgttacggcatggattgggatggcaagcgccatttggcagacctgctaaaagaa
ctatgtaaaatggacttccactggattcgcttgcactatctctatcccgacgaaatcacc
ccagagttgattgaagtcatggcgcaagaggaaaaaatcctgccttatttggatttgccc
attcagcactgcaacgacaccgtgctcaccgccatgaatcgccgtggcaacaaggcctat
cttctggatttgttccctaaattgaaggaagccctccctggcttggtggtgcgaacctcc
ttgattacaggcttgcccggtgaagatgaagaagcctttgaagagctctgcgacttcttg
cgtgaagtgaatttgcaacgggttggggtgttccccttctcccctcaagagggtacccct
gcagaaaaaatggagcgcgtggagtttgaagaagcggttcgtcgtgccgatttgctggtg
gatgtccaatctcgtatcatggatgattataacgagtctgcgttgggggaagaacgggaa
attctctgcgaaggatttgacagccaaacccaaatgtattttggtcgcagttatgccgag
tctcctgacattgatggccgtgtgcattttgaagcagagggcgaagtggaacctggcacc
tttgtcatggtgcaaatcaccgacactatggacggggaattgactgggaagatggtataa
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