Bengtsoniella intestinalis: RFF05_08825
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Entry
RFF05_08825 CDS
T10691
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie00220
Arginine biosynthesis
bie00240
Pyrimidine metabolism
bie00250
Alanine, aspartate and glutamate metabolism
bie01100
Metabolic pathways
bie01110
Biosynthesis of secondary metabolites
bie01240
Biosynthesis of cofactors
Module
bie_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RFF05_08825 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RFF05_08825 (carB)
00220 Arginine biosynthesis
RFF05_08825 (carB)
Enzymes [BR:
bie01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RFF05_08825 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
DAP_epimerase
CPSase_L_D3
MGS
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
GARS_A
ATP-grasp_5
ATP-grasp_4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
XAY17371
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Position
complement(1822651..1826697)
Genome browser
AA seq
1348 aa
AA seq
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MPLDTSIKKVLVIGSGPIVIGQAAEFDYAGAQACRVLKEAGVNVVLCNSNPATIMTDQAM
ADQIYLEPLTTETIKRIIRKERPDSILASLGGQTGLTLAMQLDKEGFLEREGVRLLGTSA
AAISEAEDRDLFKKCMERIGQPCIPSDIAETVEQALAVAEKIGYPVIVRPAFTLGGGGGG
AAANVEELRATAKSGLDASPITQILVEKAIFGWKEIEFETMRDAVGNVIAVCSMENFDPV
GVHTGDSIVVAPTQTLADKEYQMLRTASLDIISHLGIVGGCNCQLALNPDSFEYAVIEVN
PRVSRSSALASKATGYPIAKVTAKIALGYTLDEIQNDITGKTCACFEPALDYIVVKMPKW
PFDKFVDASRKLGTQMKATGEVMAIAPSFEMALMKSVRGAEISMDSLNRKHEDETPILER
LTRVDDHRLFTVFEALKSGITMEQIHDITKIDIWFLAKLQKLSKFEAALATDGLSAALYA
QGKQFGYTDATMLKLSGADALPVDTAPSAVYKMVDTCAAEFDAQTPYFYSSFDKFCESRT
FPRSGKPVMMVLGSGPIRIGQGIEFDYSSVHCVRTLKELGYEVVIVNNNPETVSTDYDTA
DRLYFEPLCPEDVMHIIEVEKPEGVVVAFGGQTAIKLTQFLDNKGVKILGTSAKSIDMAE
DREQFDALLERFDIKRPRGRGVTGLEEALDAARELGYPVLLRPSYVIGGQNMVIAYNDDN
VRNYMDVILSGGIENPVLVDQYLQGRELEVDVISDGKDVLIPGIMQHIERTGVHSGDSMA
VYPPFSIGDKMKEVIIECSEKLALSLGTQGLINIQYLIYEGELYVIEVNPRASRTVPYIS
KVTGVPMVDLATRVMVGQPLADLGYGIGLYKTPPYVTVKVPVFSFEKLNDANASLSPEMK
STGEVLGIGNNFQEAMFKGLLSAGYKLDREKKGGVLISVNHRDQPEVVGIARKLDDMGYK
LYATEGTAIEISQLGTDVEIVGKLGKDNRVFTLLEEGAIDYVILTGSTEPDYIKDFIRLN
RRCVQLGIPCLTSLDTASTLCDILASRYTQKNTELVNICNLREKRQKLKFTKIQTCGNDY
IIMENFDGAITSPESVSVGLCHRNFGVGADGIVLISGSDSADVRMDMYNKDGSLGYMAAN
AMRCVAKYIYDRKMCSEAHVEQGLVTIENALGVTDVHVYTTAGRVTSATMVMGKASLNMG
AMTTFDMDTIVDYPVEIGGTEYAITCVDLGNPHCVVECNLVDGVDVAGIGPMFENAPYFP
QRTNTEFIRVVNPHTIKMRVWERGSGETLACGTGACAAVVAAVTNGKCEKDTDITVKVAG
GDLLVRYSGDSVSLTGDAKQVFEGSARY
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgccattagatacatccatcaaaaaagttttggtcatcggttctggccccatcgtcatc
ggacaagccgccgagtttgactacgctggcgcacaggcctgccgtgtgctgaaagaagca
ggggtcaatgttgttttgtgcaactccaaccctgctaccatcatgaccgaccaagccatg
gctgaccagatttatctggagcccctgaccactgaaaccatcaagcggattatccgcaaa
gagcgtcccgacagcattttggcaagtctgggcggtcaaactggcctgacccttgctatg
caactggacaaagaaggcttcttggaacgggaaggcgtgcgcctgctgggcacctctgct
gccgccatttctgaggcagaagaccgcgacctgttcaaaaagtgcatggagcgcattggc
caaccttgcatcccttctgacattgccgaaaccgtggaacaagccttggcggttgctgag
aaaatcggctatcctgtcattgtccgtcctgccttcaccttgggtggcggcggcggcggt
gcggcggccaatgtggaagaattgcgtgccactgccaagtctggcttggatgcctctccc
atcactcaaattctggtggaaaaggcaatttttggctggaaagaaatcgaatttgaaacc
atgcgtgacgctgtgggcaatgtgattgccgtctgctccatggaaaactttgaccccgtt
ggcgtccacactggggactccatcgtggtggcacccacccaaaccttggcagacaaagag
tatcaaatgctccgtactgcttctctggacatcatctcccatctgggtattgtgggtggc
tgtaactgccaattggcgctgaaccccgatagctttgagtatgcggtcatcgaagtgaac
ccccgtgtgtctcgctcctctgcgttggcttccaaggccactggctatcccattgccaag
gtcacggctaaaatcgcactgggttatactttggacgaaatccaaaacgatattaccggc
aaaacctgtgcctgctttgagcctgcactggattatatcgtggtgaaaatgcccaagtgg
cccttcgacaaatttgtggatgcgtcccgtaaactgggcacccaaatgaaggccactggc
gaagtgatggccattgcccccagctttgaaatggcgctgatgaagtctgtccgtggggct
gaaatttccatggatagcctcaaccgcaagcacgaggacgagacccccattttggaacgg
ctcacccgtgtggacgaccatcgtctgttcaccgtgtttgaagcgttgaaatctggcatc
accatggagcaaatccatgacatcaccaaaatcgacatctggttcttggcaaaactgcaa
aagctttccaagtttgaagccgctttggcaactgatggcttgagcgctgcgctgtacgcc
caaggcaaacaatttggctacaccgatgccaccatgttgaagctctctggcgctgacgct
ctgcctgttgacaccgcaccttctgctgtgtacaaaatggtggatacctgcgccgctgaa
ttcgacgcacaaaccccctatttctactctagctttgacaaattctgcgaatctcgcacc
ttccctcgctctggcaaacctgtgatgatggtgctgggttctggccccatccgcatcggg
caaggcattgaatttgactactcctctgtccactgtgtgcggacattgaaggaactgggc
tacgaagtggtcatcgtcaacaacaaccccgaaaccgtctccaccgactatgacaccgcc
gaccgtctgtactttgagcccctgtgcccagaggacgtgatgcacatcattgaagtggaa
aagcctgagggtgttgtggtagcctttggtgggcaaaccgccatcaaattgacccaattc
ttagacaacaagggcgtgaaaattctgggcacctctgccaagtccatcgacatggcggaa
gaccgtgaacaatttgatgccctgctggaacgcttcgacatcaagcgcccccgtggtcgt
ggtgtcactggtttggaagaagcactggatgccgcccgtgaactgggctaccctgtcctg
ctccgtccttcctacgtcatcggcggtcaaaacatggtcatcgcctataacgacgacaac
gttcgcaactacatggacgtcatcctctctggtggcatcgaaaaccctgtcttggttgac
caatatctccaaggccgtgagctggaagtggatgttatctccgacggcaaagacgtattg
attcccggcatcatgcaacatatcgagcggactggtgtccacagcggtgactccatggcg
gtgtatcctcccttctccattggcgacaaaatgaaggaagtcatcatcgaatgctctgaa
aaattggcgctgtccttgggcacccaaggtttaatcaacatccaatatctcatctacgaa
ggcgaactctacgtcatcgaagtcaacccccgtgcgtctcgtactgtgccttatatttct
aaggtgactggcgtgcccatggtggatttggccacccgtgtcatggtggggcaacctttg
gcagacttgggctacggcattggtttgtacaaaacacctccttatgtcaccgtgaaagtc
cctgtgttctcctttgaaaaattaaacgatgccaacgcatctctgtcccctgaaatgaag
tccactggggaagtgctgggcattggcaacaacttccaagaagccatgttcaagggtctt
ttatccgctggctacaagctggatcgtgagaaaaagggcggcgttttgattagcgtcaac
caccgtgaccaaccagaagtggtgggcattgcacggaaactggacgacatgggctacaag
ctgtatgccaccgaaggcaccgccattgaaatttcccaactgggcaccgacgtagaaatc
gtgggcaaactgggcaaggacaaccgtgtgttcaccctgctggaagaaggcgccatcgat
tacgtgattttgactggctccaccgaacctgactacatcaaagatttcatccgcttgaac
cgccgttgcgtccaactgggcatcccttgcctcacttctttggacacagcctccactttg
tgcgacattttggcctctcgttacacccaaaagaacaccgaactggtgaacatttgtaac
ctgcgtgaaaagcgtcaaaagctgaagtttaccaagattcaaacttgtggcaacgactac
atcatcatggaaaacttcgacggtgccatcaccagccctgaatctgtcagcgttggcctg
tgccatcgtaacttcggggtgggtgccgacggcattgtgctgatttctggctctgatagc
gccgatgtgcggatggatatgtacaacaaagatggctctttgggctatatggctgccaat
gctatgcgttgcgtggcaaagtatatttatgaccgcaaaatgtgcagtgaagcccatgtg
gaacaaggcttggtcaccatcgaaaacgccttgggcgttaccgatgtccatgtctacacc
accgctggtcgggtcacctctgccaccatggtcatgggcaaggcatccctcaacatgggt
gctatgaccacctttgacatggataccattgtggattaccccgtggaaattggtggcaca
gaatatgccattacctgcgtggatttgggcaacccccactgtgtggtggaatgcaatttg
gtggacggcgtggacgtggctggcattggccccatgttcgaaaacgcaccgtatttccca
caacggactaacaccgagttcatccgtgtggtgaaccctcacaccattaaaatgcgtgtg
tgggaacgtggctctggggaaaccttggcctgcggtactggcgcctgcgccgccgtggtg
gcagccgtcaccaatggcaagtgcgaaaaagacaccgacatcaccgtcaaggtggcaggt
ggcgacctattggtgcgctactctggcgacagtgtcagcctaactggcgatgccaagcaa
gtgtttgaaggctctgcacggtattaa
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