Bengtsoniella intestinalis: RFF05_08990
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Entry
RFF05_08990 CDS
T10691
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bie Bengtsoniella intestinalis
Pathway
bie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RFF05_08990 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bie03019
]
RFF05_08990 (rny)
Messenger RNA biogenesis [BR:
bie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RFF05_08990 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
DUF4407
Motif
Other DBs
NCBI-ProteinID:
XAY17404
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Position
1864325..1865872
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AA seq
515 aa
AA seq
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MTELIITGVITLAVGLAVGFPLGIRYRKIVSEKEISSAEAEGTRIINEAIKRAESQKREA
LLEAKEEILKNRSEYEKEVKERRSELQRQENRLQQKEENMDRKTEALEKKEESLASKHQH
ADQENQTIAKLKETQLSELERISGFTVDEAKAYLIDQVEAEVTHETALKIKEIESRMREE
ADMRGKEIVAQAIQRCAADSVAEMTVSVVPLPNDEMKGRIIGREGRNIRTIETMTGVDLI
IDDTPEAITVSCFEPVRREVARLALSKLISDGRIHPTHIEEMVEKARKEVDTIIKAEGER
VTFETGVRNLHPELSRMLGRLHYRTSYGQNVLQHSVEVSHIAGMMAAELGADVQAAKRAG
LLHDLGKSVDHEMEGTHVALGVEFARKYKEKEDIIHAIEAHHFDVEPRTLVACLVQAADA
ISAARPGARRENLENYIKRLEQLETITGTYPGVEKAYAIQAGREVRVMVKPEQVSEDQMV
ILARELSKKIEDEMEYPGQIKVHLLRETKVVDYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaactgattatcaccggcgtaattacgctggcagttggtctggctgttggcttc
cctcttggtattcgctaccgtaaaatcgtgtccgaaaaggaaatttccagcgcagaagca
gaaggaacccgcatcatcaacgaagccatcaaacgtgctgagtctcaaaagcgcgaagcc
ctgctagaagccaaagaagagattttgaaaaaccgcagcgagtatgaaaaggaagtcaaa
gagcgcagatctgaactgcaacgtcaagaaaatcgactgcaacaaaaagaagaaaacatg
gaccgcaaaaccgaagccttagagaaaaaagaagaatctctggcttccaaacatcaacat
gccgaccaagaaaaccaaaccattgccaagctgaaagaaacccagctcagcgaattggaa
cggatttctgggttcaccgtggacgaagccaaggcttacctcatcgaccaagtagaagcc
gaagtcacccacgaaaccgccttgaaaatcaaagaaatcgagtctcgtatgcgcgaagaa
gcggatatgcgtggcaaagaaatcgtggcacaagccatccaacgttgcgctgcagatagc
gtagcagaaatgaccgtcagtgtggtgcccctgcccaatgacgaaatgaaaggccgcatt
atcggccgtgaaggtcgcaacatccgcaccatcgaaaccatgactggtgtggacttgatc
atcgacgatacccccgaagccatcaccgtttcttgctttgaacctgtgcgccgtgaagtg
gctcgcttggcactgtccaagttgatttccgacggccgcatccaccccacccacattgaa
gaaatggtggaaaaggcacgcaaggaagtggacaccattatcaaagccgaaggcgaacgc
gtcacctttgaaactggcgtccgaaatcttcaccccgaactatcccgtatgctgggtcgt
ttgcattatcgcaccagctatggtcaaaatgtgttgcaacacagcgtggaagtgtcccac
attgctggcatgatggccgcagagttgggtgccgatgtgcaagctgccaagcgcgctggt
ttgctccacgatttgggcaagtctgttgaccatgaaatggaaggcacccatgtggctttg
ggcgtggaattcgcccgtaagtacaaggaaaaagaagatatcatccatgccattgaggct
caccattttgatgtggaacctcgtaccctagtggcctgtttggtgcaagccgccgatgcc
atttccgccgcccgtcctggcgcacgccgtgaaaacttggaaaactatatcaagcgtctg
gaacaattggaaaccatcactggcacctaccctggcgtggaaaaggcctatgccatccaa
gctggtcgtgaagtccgtgtcatggtcaaacctgaacaagtcagcgaagaccaaatggtc
attctggctcgtgagctgtccaagaaaatcgaagacgaaatggaataccctggtcaaatc
aaggtgcatctgctccgtgagaccaaagtggttgactacgcaaaataa
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