Bengtsoniella intestinalis: RFF05_09030
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Entry
RFF05_09030 CDS
T10691
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RFF05_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bie03021
]
RFF05_09030
03400 DNA repair and recombination proteins [BR:
bie03400
]
RFF05_09030
Enzymes [BR:
bie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RFF05_09030
Transcription machinery [BR:
bie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RFF05_09030
DNA repair and recombination proteins [BR:
bie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RFF05_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
DUF2325
Motif
Other DBs
NCBI-ProteinID:
XAY17409
LinkDB
All DBs
Position
complement(1875010..1875960)
Genome browser
AA seq
316 aa
AA seq
DB search
MIEIEKPQIDCNEMLGDATYGKYVVEPLERGYGTTLGNALRRIMLSSLPGTAPTSIKVAG
VQHEFSTITGVKEDVTEIVLNVKGLLTKLHCETSKTVYIEAVGPCEVTAGDIKADSDVEV
LNPDLHIATLDAGAVLNMEIALSHGRGYVPADRNKPAQNVIGTIAVDSIYTPVYKVNYFV
EPTRVGASSDFDKLTLEVWTDGTISSRDAVSLGAKILCDHFSLFTDLSETVGSKSTVVEK
AEAQRDKVLELSIDDMDLSVRSYNCLKRANINTVEDLISRTEDEMMKVRNLGRKSLEEVI
NKLEMMGLSLAIDENT
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccccagattgattgtaacgaaatgctaggcgacgccacttac
ggaaagtacgtggtagaacccctagagcgaggctatggcaccaccctgggtaatgcgctg
cgccgcattatgctgtcctctttgcctggtacggctccaacctctattaaggttgcaggc
gtccagcatgaattttccaccatcactggtgtaaaagaagatgtgacggaaatcgtttta
aacgttaagggtttgctgaccaagctgcattgcgaaacaagcaaaacagtatatatcgaa
gcagttggcccttgtgaggtcactgccggcgatatcaaggctgacagcgacgtggaagtt
ctgaatccagatcttcacattgctactttggacgcaggtgccgtgctgaacatggagatt
gcactctctcatggtcgtggctacgtccctgctgaccgcaacaagcctgcacaaaatgtc
atcggcaccattgctgttgactctatctacacccctgtctacaaggtcaattactttgtg
gaacccacccgtgtgggcgccagcagtgattttgacaagttgactttggaagtctggact
gacggcaccatctctagccgagatgctgttagccttggcgctaagattttgtgcgaccat
ttctctttgttcactgacctttctgaaaccgtgggtagcaagtctaccgtggtggaaaag
gcagaagcccaacgcgataaagtgttggagctgagcattgacgacatggacttgtccgtg
cgtagttataactgcctcaagcgtgctaacatcaacaccgttgaagatctgatttccaga
acagaagacgaaatgatgaaggtgcgtaatctgggtcgtaagtccctagaggaagttatc
aacaagctagaaatgatgggcttgagcttggccatcgatgaaaacacctaa
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