Bengtsoniella intestinalis: RFF05_09480
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Entry
RFF05_09480 CDS
T10691
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bie Bengtsoniella intestinalis
Pathway
bie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RFF05_09480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bie03400
]
RFF05_09480
Enzymes [BR:
bie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RFF05_09480
DNA repair and recombination proteins [BR:
bie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RFF05_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
PIF1
PhoH
AAA_16
AAA_22
Herpes_Helicase
Zeta_toxin
AAA_25
NACHT
nSTAND3
UvrD_C
ABC_ATPase
AAA_23
ABC_tran
Helicase_RecD
ORC-CDC6-like
DEAD
AAA_29
AAA_28
AAA_12
HerA_C
T2SSE
ATP_bind_1
SLFN-g3_helicase
YqeC
cobW
SMC_N
ATPase_2
AAA
AAA_14
RsgA_GTPase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XAY14071
LinkDB
All DBs
Position
1971241..1972785
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AA seq
514 aa
AA seq
DB search
MAKIAYHRPKRGDYILDAIDKMMKGGDSFVYEDALFQRAQNQRQKLSRNGFELDLACLFQ
AGKLYCVGRRIYHQRTLNYEQATATKLAELLLENDLPSPPLPDPLTVRGITLDDSQRRAV
SMALSHRLSIILGGAGSGKTTLLRAIAERCTGGGSMVLCAPTGKAACNLTERTAIQARTV
HSALSKAPDEDFLKPVDWSSVRLVLVDEASMMTLELLTGILHVVKKECRVVLVGDPNQLL
SVGAGNVLPDLLQLGVPRTILEGCHRQDDGAVALKSNVVDFKNCAMIEDLKQDDSFQFIP
LFSEAEIQKFVTQEGAKRYLNGENFQVLSPRNFGHPLSVEKLNLVLRKLVNPAKKDTLSL
VCRGRRFFTGDRVMVTKNDWDRKVCNGHIGTFGVCSVDEEAPVYGVATDHAVAMWEGWSG
IENLTHAYAITIHKSQGSEYDTVIIPVHKNLGKFMYRNLLYTAISRAKQKVILVGDPDAL
AQALRTPTPERKSVLVAQTNMKIYQASQAKEEIA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattgcgtatcaccgccccaaacgtggcgattatatcctcgatgccatcgac
aaaatgatgaagggcggcgacagttttgtgtatgaggatgcgctctttcagcgtgctcaa
aatcaacgtcaaaagttgagtcgaaatggctttgaactggacttggcatgcctgtttcaa
gcaggcaagctgtactgtgttggacgacgaatttatcatcaacgcaccttgaattatgag
caggcaactgccaccaaattggcggagctgttgcttgaaaatgaccttccatcgcctccg
ttacctgaccctttgaccgtccgtggcatcacgctggatgacagccaacgacgtgctgtt
tccatggcactgagccatcgtctttcaatcattttaggcggtgcagggtcgggtaaaacc
acccttttgcgtgccattgcagagcgttgtactgggggtggaagcatggtgctgtgtgcg
cccacgggcaaggctgcttgcaacttgacagagcgcactgccatccaagcgcgcaccgtt
cacagcgccttgagtaaggctcctgacgaggactttttgaagcctgtggactggagttct
gtccgtttggtgctggtggacgaagcgtccatgatgaccctagaattgctgactggcatc
ctccatgtggtgaaaaaagagtgccgtgtggtgctggtgggcgaccccaatcaactactc
tctgtgggcgcaggaaacgtcctgccagacctattgcaactgggtgtgccacgcaccatt
ttggaaggctgtcaccgacaagatgatggcgctgtggcgctgaaatccaacgtggttgac
ttcaagaattgtgccatgattgaggacttaaagcaagacgattcgttccaattcatcccc
ctgtttagtgaagcagaaattcaaaaattcgtaacccaagaaggtgccaaacgctatctc
aacggtgagaattttcaggtgctttctcctcgcaatttcggccatccactgtcggtggag
aagctgaacttggtgcttcggaagttggtcaacccagcgaaaaaagatacgctcagtttg
gtttgtcgaggtcgaagatttttcacaggtgaccgtgtgatggtgacgaaaaacgactgg
gaccgcaaggtttgcaacggtcatattggcacctttggggtgtgctctgtggacgaagaa
gcacctgtttatggggtggcaaccgaccacgctgtggccatgtgggaggggtggtcaggc
attgaaaatttgacccatgcctacgccattaccatccacaaatcgcagggtagcgagtac
gatacggtgattattccagtgcataaaaacttgggaaaattcatgtacagaaacttactt
tacaccgctatctctagagcaaaacagaaggtgattttggtgggtgaccccgacgctctg
gcgcaagctctacgcacgccgacgcccgagagaaagtcagttctggtggcgcagaccaac
atgaaaatttaccaagcaagccaagcgaaggaggagattgcatga
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