Bacillus infantis: N288_00710
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Entry
N288_00710 CDS
T02860
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bif
Bacillus infantis
Pathway
bif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N288_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bif03021
]
N288_00710
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_00710
Enzymes [BR:
bif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N288_00710
Transcription machinery [BR:
bif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N288_00710
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N288_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGX02159
UniProt:
U5L462
LinkDB
All DBs
Position
131916..135515
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDSGDTALEKKQLLSEKEYRAYREKYGNKFQASMGAESIKKLLS
DIDLNKEVDALKEELTTAQGQRRTRAIKRLEVLEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAVGEGMVFNDTSEALLAYQNGYVHLHTRVAVN
AGTLNNETFTEEQRKKLLITTVGKLVFNEILPTSFPYINEPTKTNLEEETPARYFVERGT
DVKEAIKNMPLVDPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFRHSTKAGITVGV
ADIVVLKEKQEIIQEAQGKVDNVLKQFRRGLITEDERYDRVISIWSAAKDTIQAKLMKSL
DKSNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLQISALKDGTEVIEALD
ERLIGRYARRDIKHPETNAVIVKENDLITEDLAVEIVEAGIETVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISELEGVVVGINEGRDRQHEIVVQGEVESRTYTAPYTARLKVAVDDRVDR
GQELTEGSIDPKELIKVRDVNAVQEYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
IDAGETEVLPGSLLDIHQFTDANEKALLNGKMPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRRAEPFTAEEASEETVTVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtaaacaattttgagtatatgaagatcggtcttgcttcacctgataagatc
cgttcctggtcttttggtgaagtcaaaaaacctgaaacaatcaactatcgtacattaaag
cctgaaaaagacggcttattctgcgagcgtattttcggacctcagaaagactgggaatgc
cattgcggaaaatacaaaagggtgcgctataaaggcgtagtctgcgaccgatgcggagtg
gaagtcacccgcgcgaaggttcgccgcgaaagaatgggccatatcgagcttgctgctcct
gtatcgcatatctggtatttcaaaggcatcccaagccgcatgggccttgttctggatatg
tcaccgcgtgcgcttgaagaagtcatttactttgcttcatatgtagtaactgattccggc
gatacagcactagagaaaaaacagcttctgtctgagaaggaataccgcgcttaccgtgag
aagtacggcaataagttccaggcatccatgggtgcagaatccatcaagaagctgctttct
gatatcgatctgaacaaagaagtagacgcgcttaaagaagaactgacaactgcccagggc
cagcgccgcacacgcgccatcaagcgccttgaggtacttgaagccttccgtggatctgga
aatgaaccatcatggatgatcctggacgtgcttcctgtcatccctcctgagcttcgtcca
atggttcagcttgacggaggaagattcgcgacgtctgacctgaacgatctgtaccgccgt
gtcatcaaccggaacaaccgtctgaagcgcttgctggacctcggtgctccaagcatcatc
gtccagaacgaaaagcgcatgctccaggaagctgtagacgccctgattgacaatggccgc
cgcggacgtcctgtcacaggcccggggaacaggccgcttaaatctctttcacacatgctg
aaagggaagcagggccgtttccgtcagaacctgcttggtaagcgtgttgactactccgga
cgttctgttatcgtagtaggtcctaacctgaaaatgtaccagtgcggtctgccgaaggaa
atggcgcttgagcttttcaagcctttcgtcatgaaggaattggtggaaaaaggactggct
cacaatatcaaatcagcaaagcgcaaaattgaaagagtccagcctgaggtatgggatgtg
cttgaagaggtaatcaaagagcacccagttctgctgaaccgtgcacctactcttcacagg
ctcggaatccaggcctttgaaccaacattggttgaagggcgcgcaatccgtctccatccg
cttgtatgtacagcatacaatgccgactttgacggtgaccaaatggcagtccacgtaccg
ctgtcatctgaagcacaggcagaagcacgccttctaatgcttgcggctcagaacatcctg
aaccctaaggatggaaaacctgttgttacaccttcccaggatatggtgcttggtaactat
tacctgactatggaaagagaaggggcagtaggagaaggaatggtcttcaacgatacaagc
gaagcactgcttgcttatcagaacggctatgtccaccttcatacccgtgtagcagtgaat
gcaggtacactgaacaatgaaacattcacagaggaacaaaggaaaaagcttctgatcacg
actgtcggaaagctcgttttcaacgaaatcctgccgacttcattcccgtatatcaatgag
ccgacaaagacgaatcttgaagaagaaacgcctgcccgctactttgtagaacggggaacg
gatgtaaaagaagctattaaaaatatgccgcttgttgatcctttcaagaagaaaatcctt
ggaaacatcattgcggaagtgttcaagcgctttaagatcactgaaacatccaaaatgctt
gaccgcatgaaggatctcggtttcagacattccactaaagccggcatcacagtcggtgtg
gcagatatcgtcgttcttaaagaaaagcaggaaatcattcaggaagcccaaggcaaggtt
gataatgtccttaaacaattcaggcgcggtctcatcactgaggacgaacgctatgatcgt
gtcatttccatctggagtgctgcgaaggacactatccaggccaagctgatgaagtccctg
gataaatccaacccgatctttatgatgagtgactccggtgcccgtggtaacgcatctaac
tttacacagttagccggtatgcgcggactcatggccaacccggccggccggatcatcgaa
cttccgatcaagtccagcttccgtgaaggactgacagtacttgagtacttcatctccaca
cacggagcgcgtaaaggattggcggatacagcccttaagacggctgactccggctatctg
acccgacgccttgttgacgttgcgcaggatgtcattgtacgtgatgatgattgcggaaca
gacagaggactgcagatcagcgcgctgaaggatggcaccgaagttatcgaagcactggat
gagcgcctcattggccgttatgcacgcagagatatcaagcatcctgaaacaaacgcagta
atcgtaaaagaaaatgatcttattacagaagatctggctgttgaaatcgtggaagcaggc
attgagactgtatggatccgttccgcctttacctgcaacacgcgccatggcgtatgtaag
aaatgctacgggcgcaacctggcaacaggccaggaggttgaagtgggcgaagctgtcgga
atcatcgcagcccaatccatcggtgagcctggaacacagcttacaatgcgtactttccat
acaggaggcgtagcaggagacgatattacacaaggtcttccgcgtatccaggaaattttc
gaagcacgtaaccctaaagggcaggctgtcatttcagagcttgaaggtgttgtcgtgggc
atcaatgaaggccgtgaccgccagcatgaaattgtggtgcagggcgaggttgaatcccgc
acatatactgctccatatacagcacgcctgaaagtggctgttgatgacagggtagaccgc
ggacaggaattgaccgaaggttctattgaccctaaagaattgattaaagtaagagatgta
aatgctgtacaggagtatctgcttcgcgaggtgcagaaggtataccgtatgcagggtgtt
gaaatcggcgataagcatatcgaggtaatggtccgccagatgcttcgcaaggtgcgtgtc
atcgatgcaggggaaacagaagtgctgcctggctcgcttcttgatatccaccagttcaca
gatgccaatgaaaaggctctgttgaacggcaaaatgcctgcgaccggccgtcctgtactg
ctcggtatcaccaaggcttcacttgagacggattccttcctgtcagctgcttccttccaa
gaaacaacaagggtacttacagatgctgccatcaaaggcaagcgagatgaattgctcggg
cttaaagagaatgtcatcatcggtaaactggtccctgccggaactggaatgcagcgctac
cgcagggcagaacctttcactgcggaagaagcatccgaagaaacagttacagtggaataa
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