Bacillus infantis: N288_01475
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Entry
N288_01475 CDS
T02860
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bif
Bacillus infantis
Pathway
bif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N288_01475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bif03019
]
N288_01475
03009 Ribosome biogenesis [BR:
bif03009
]
N288_01475
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N288_01475
Messenger RNA biogenesis [BR:
bif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N288_01475
Ribosome biogenesis [BR:
bif03009
]
Prokaryotic type
rRNA helicases
N288_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGX02281
UniProt:
U5L6A6
LinkDB
All DBs
Position
248583..250079
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AA seq
498 aa
AA seq
DB search
MTKFQDLGISPATMKSLKRMGFEEATPIQAETIPLSLANKDLIGQAQTGTGKTAAFGVPL
IDKIDTSKDVIQGIIIAPTRELAIQVSEELYKIGYGKRARVLSIYGGQDINRQIRALKKP
PHIIVGTPGRVLDHIKRKTLRLDNVHTAILDEADEMLNMGFIEDIESILASVPVERQTLL
FSATMPAPIQRMAERFMRDPQIIRVKAKEMTVPLIEQFYVEVQERTKFDVLTRLLNIQSP
ELAIIFGRTKRRVDELAEALNLRGFLAEGIHGDLSQAKRMSVLRKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKEGMAMTFITPREKSYLAVVERTTK
SKMGKMVPPTLAEALEGQQKAAVDKISQAISANNLENYKEAADELLEQHDASDVVAAVLK
LLTKEPDDTPVKLTEEKPLPSKRDRKPYDRRRSNDNRRGSDNRRGYDSKRKDGQYKPRQG
QGGRRQGNYSNRTSDSSR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagtttcaagatttaggcatcagtcctgctacaatgaaatcactaaaaagaatg
gggtttgaagaagctaccccgatccaggccgaaacaattcctttgagcctggcaaataaa
gatctgatcggccaggcgcagaccggtacgggaaagaccgctgcattcggagttccgctg
attgataaaatcgacacaagcaaggatgttatccaggggatcatcattgctccgacccgg
gagcttgcaatccaggtgtctgaagaactatataagatcggctacggaaaaagagcacgc
gtgctttctatttacggaggccaggatatcaaccgccagatccgtgcccttaaaaagccc
cctcatatcatcgttggaacaccgggaagggtgcttgaccatattaaacgcaagacgctc
cgcctggacaatgttcacacagcgatccttgacgaagcagatgaaatgctgaacatgggc
tttatcgaggacatcgaatccattctggcaagcgttcctgtggaaagacagaccctcttg
ttctctgccacaatgcctgcaccgatccagagaatggcagaaagattcatgagagacccg
cagatcatccgtgtcaaagcaaaggaaatgacggttccgcttattgagcaattctatgtg
gaagtacaggagagaaccaaatttgacgtactgactcgccttctgaatatccagtcacca
gaactggccatcatctttgggcgtaccaaaaggcgtgtggatgagcttgcagaggcgctg
aatttgagaggcttccttgcagaaggaattcacggagacctcagccaggcaaagcgtatg
tctgtcctgagaaagttcaaggaaggatccatcgatgttcttgttgcgactgatgttgct
gcgaggggtcttgatatttccggcgtaacacatgtatacaactttgacatccctcaggat
cctgaaagctatgttcaccgcatcggccgtacagggcgtgcaggaaaagaaggaatggcg
atgacattcatcacgcctcgtgagaaatcatacctggctgttgttgaaagaacgaccaag
agcaagatgggaaaaatggtgccgcctacgcttgctgaagccctcgaaggccagcagaag
gcagcagtcgacaagatttcacaggcaatcagtgccaataacctggaaaactataaagag
gcagctgatgagcttcttgagcagcacgatgcttctgacgttgtggcagctgtcctgaag
ctgttgacgaaagagccggacgatactcctgtcaagctgacagaagaaaagccgcttcct
tccaaaagggacagaaagccatatgaccgcagaagaagcaatgacaatagaagaggcagc
gacaacagaagaggctatgattccaaaaggaaagacggccaatacaaaccaaggcaggga
cagggcggacgccgtcagggcaattattccaaccgtacctccgatagcagccgttaa
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