Bacillus infantis: N288_07210
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Entry
N288_07210 CDS
T02860
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bif
Bacillus infantis
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_07210
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N288_07210
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N288_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGX03373
UniProt:
U5L7P3
LinkDB
All DBs
Position
1295833..1299324
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AA seq
1163 aa
AA seq
DB search
MSVRFILGRSGSGKTSLCLEEIREKMKIEPNGHPVVYLVPEQMTFLSEYKLITTPGLGGM
IRTQVLSFTRLAWKVLQETGGISRYHLNSTGVNMLIRKIIEDKKDELKIFQRAAGKNGFI
GQMEQMLTEFKRYCIEPGALAGKREELESRRGSRGLQDKLHDMELIYKQFEEGLLGKYVD
SEDYFRLLTEKAGMSEYLKNAEVYIDGFYSYTPQEYMIIEQLIRVCKRVTVTFTLDRPYK
TAVPEDLHLFRMSAESYQSVYEIAGMAGAEMEQEVLLNGQQRWDNDSLRHMERAFSSRPA
EPFAGKANVHIAQAVNRRAEIEGAAREIKRLAAEEGYRFKDIALLMRNGSVYHDIIETIF
DDYGIPFFIDQKRTMMNHPLIELIRSSLEVITGYWRYEPVFRAVKTELLFPSRADLGVIR
EKMDKLENYVLAYGVQGEKWTKKDRWNYRRIRGLEFEQIVQTDLEKEREEELNQMRDLIA
APILRLSRRLKKADSGRRLCEAVYLYLEELDIPTKLERWKLEEEDKGNLVKAREHDQAWN
AVMELLDQFVEMLGDEKISMKQFASILDSGMESLRFSLVPPAMDQVLAADLDKSRLSDIK
AAFVIGLNEGVLPGKFTEEGVLADADREKLLQSGLKIAHGSKVRLLDEDFLAYRAFSTPS
SHLYISYPLANEEGKALMPSPYISRANELFPEAGQLMWMADPFELPEEEQLLFAMNEDTS
LSYLASQLQMNKRGYKISGIWWDVYNYYHAHPRLGDTARKVLSSLHYENRTARLSEEAAK
ELYGETIQASVSRMELFHSCPFSHFAQHGLKLRDRKVFRLEAPDIGDLFHAALKFIAETV
MDKRMSWSDMTRQECEKLAKEAVEMLAPKLQNEILLSSNRHFYIKRKLENIISRASYILS
EHSRASGFSPVGLELGFGPKDKLPPLSFKLRNGTNMELVGRIDRVDKAENENGVYLRVID
YKSSARDLNISEVYYGLALQMLTYLDIIITHSGDIAGKKADPAGVMYFHVHNPIVNSPKL
LTLDEIEEEIFKKFKMNGLLLGDENVLRLMDQTLDSGDSSIISAGFKKDGTITKRSKVAT
RDDFESLRKFVRGTYTKTGDAIISGSADISPYKMKDKVPCTFCSFKSVCQFDESVESNEY
RVLSPKSNEELMDKIRKEAGENG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgttttatattaggccggagcggcagcggcaagacttcgctctgccttgaa
gaaatcagggagaaaatgaaaatcgagccgaatggccatccagttgtttatctggtgcct
gagcagatgacgtttctttcggaatataagctcatcacaaccccggggcttggcgggatg
atccgtacacaggtcttgtcatttacaaggcttgcctggaaggtgctgcaggaaacaggc
gggatcagccgctatcatttgaacagcaccggcgttaatatgctcatcagaaaaataatt
gaagataaaaaagatgaactgaaaatctttcagcgggcggcaggcaagaacggctttatc
ggccaaatggagcagatgctgacagaattcaaacggtactgcattgagccgggagctctt
gcagggaaacgggaagaacttgaatcccgaaggggcagcagggggcttcaggacaagctg
catgatatggaattgatctataagcagttcgaagaaggccttcttggcaagtacgtagat
tctgaagactatttccgccttcttactgaaaaagcagggatgtcggagtacctgaaaaat
gccgaggtgtatatcgacggcttttacagctatacgccccaggaatatatgatcatcgag
cagcttatcagagtctgcaaaagagtgacggtgacatttacgcttgacaggccatataaa
acagcagtcccggaagatcttcatcttttcaggatgtcggcagaatcataccagtcggtc
tatgagattgcggggatggccggggccgagatggaacaggaagtgcttctcaatggtcag
cagcgctgggacaatgactcgctccgccatatggaaagagccttcagcagcaggcctgcc
gagccttttgcaggaaaagcaaacgtccatattgcacaggcagtgaacaggagagcagaa
atagaaggtgcggccagagagattaagagactggcagcagaagagggataccgatttaaa
gacattgcccttttaatgaggaatggatcagtttaccatgacatcattgaaaccatcttt
gatgattacgggattccgttttttatcgatcaaaagcggacgatgatgaaccatccgctt
attgagcttatccgctcatcacttgaggtcattaccggctactggaggtatgagcctgtt
tttcgcgcagtcaaaaccgaactgctgtttccgtcccgggcggatcttggcgtgatcagg
gaaaaaatggacaagcttgaaaactatgttctggcatatggtgtccagggcgagaagtgg
acaaaaaaggaccgctggaattaccgccgcatcagggggcttgaatttgagcagatcgtc
cagaccgacttggaaaaagagcgggaagaagagctgaatcaaatgagggacctgatcgct
gcaccgatactccggctctccaggaggcttaagaaggccgacagcggaagaaggctgtgc
gaggctgtctatctttatttggaggaattggatataccgacgaagctggagcgctggaag
ctggaagaggaagataaggggaatcttgtaaaggcaagggaacatgatcaggcctggaat
gctgtcatggagcttctggaccagtttgtagaaatgctcggggatgagaagatcagcatg
aagcagtttgcctcaatccttgattcaggaatggaatctctccgcttctctcttgttccg
ccggctatggaccaggtgctcgcagcagatctggacaaatctcgtttgtcggatataaag
gcagcgtttgtcatcgggctgaatgagggtgtcctgcctggcaagttcactgaggaagga
gtgcttgctgatgctgaccgggagaagcttctgcagtcagggcttaaaattgcccatggc
agcaaggtcaggctcctggatgaggattttctggcttatcgcgccttttccacaccttcc
tcccatctgtacatcagctatccgctcgccaatgaagagggcaaggcactgatgccgtcg
ccttatatcagccgggcaaacgaactgttcccggaggcggggcagctgatgtggatggcc
gatccgttcgaacttcctgaggaggagcagctattattcgccatgaacgaggatacgagt
ctttcttatctggcttcccagctccagatgaataaaagaggctataaaatcagcggaatc
tggtgggatgtctacaattattatcatgcccatccaaggctcggggacacggccagaaaa
gtactttccagcctgcattacgaaaacagaacggccaggctttcggaagaggctgccaag
gagctttacggggaaacgatccaggcaagtgtatcaaggatggagcttttccacagctgc
ccattttcacattttgcccagcatggcctgaagctccgggacaggaaggtcttccgcctg
gaagcgccggatatcggagatctgttccatgctgcgttgaaattcatagctgagaccgtc
atggataaaaggatgtcctggtctgacatgacaaggcaggaatgcgagaagcttgccaaa
gaagcggtggagatgcttgcgccaaagcttcagaatgagatactgctgagctcgaaccgc
cacttttatatcaagcgtaagctcgaaaatatcatcagcagggcttcgtatatactgagc
gagcacagcagggcaagcgggttctccccagtcggccttgagctcggctttggccctaag
gataaacttccgcctctgtcctttaagttgaggaatgggacgaacatggagctggtcggc
cggattgatcgggttgataaagcggaaaatgaaaatggcgtataccttcgggtgatcgat
tataaatccagcgcaagggatctgaatatcagtgaagtctactatgggcttgctctgcag
atgcttacctacctggacatcatcatcacccactcaggggatatagcagggaaaaaggcc
gatcctgcaggagtcatgtacttccatgtccataatccgattgtgaactctccgaagctt
ctcacactcgatgagattgaagaggagatctttaagaagttcaaaatgaacggccttctt
ctcggcgatgaaaatgttttaaggctcatggaccagacacttgattccggcgactcctcg
attatatcggctggatttaaaaaggacggcaccatcacgaaaaggtcgaaggtagccaca
agggacgacttcgagagccttcggaaatttgtccggggaacctacacaaaaaccggggac
gcgatcatcagcggatcagcagatatttccccttataaaatgaaggacaaggtgccttgt
acattctgttcgttcaagtcagtctgccagtttgatgaatcggttgaatcgaatgagtac
agggtgctttcccctaagtcaaatgaagaactgatggataagatacgaaaggaggcggga
gagaatggctaa
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