Bacillus infantis: N288_07215
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Entry
N288_07215 CDS
T02860
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bif
Bacillus infantis
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_07215
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N288_07215
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N288_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
LAIKA
AAA_22
AAA_30
KMP11
Motif
Other DBs
NCBI-ProteinID:
AGX03374
UniProt:
U5L6B6
LinkDB
All DBs
Position
1299317..1303081
Genome browser
AA seq
1254 aa
AA seq
DB search
MAKAIIPPKPEGAAWTDDQWKAIMASGQDILVAAAAGSGKTAVLVERIINKIVSREEPVN
VDELLVVTFTNASAAEMRHRIGEALEKAINRDPQSAHLRKQLSLLSRASISTLHSFCLEV
IRKYYYLIDIDPGFRIADETEGQLLRDEVLEELFEEEYGKENNEDFYRLVDAFTSDRSDT
ALQDIIRELYDFARSNPAPDQYLDKISDMYEVSSDAKLEELPFMSSVLFDIGLQLEGARQ
LLENALELAKTPGGPAPRAENYMDDIRAVETLIAANNDSWSSLNEAMQLWSFGRAKNCKG
DEYDPDLVKQAQKYRDKAKKMIQDLQAEFFSRRPESFIRDIGEMKPHIDVLVRLVRSFSE
KFNSVKSEKGLVDFADLEHFCLEILSDPSARKEGAILPSEPALTYRDHFREVLVDEYQDT
NMVQEAILQLVTKEGEETGNLFMVGDVKQSIYRFRLAEPNLFLGKYTRFTVDGEKTGLKI
DLARNFRSRKEVLDGTNFLFKQVMGKKVGEIDYDQAAELVKGASYPEDLPYPVELHLIDL
DGQEKAESGEADETDAGYDLEDLEQSQHEARLMAEKIKEMLSSGKKVYEPKSGAYRPLMY
RDIVILLRSMTWAPQIMEEFKKQGIPIYANLSSGYFEATEITIMMSLLKVIDNPHQDIPL
ASVLRSPIVGLNEEELAQIRIADKKGSYYEAMKAFCETKKSGDLYDKVKPFFLDIAEWRS
MARKGGLSELIWQLYRDTHFYDFAGGMPGGKQRQANLRALYDRARQYEETSFRGLFRFLR
FIERMRERGDDLGAARALGEQEDVVRMMTIHSSKGLEFPVVFAAGLARQFNTMDLKKTYL
LDKEYGFAAKYVNPEKRISYPSLPQLAFKRKKKMEMLAEEMRVLYVALTRAKEHLFLVAS
VKNADKKLAGWQQGAKKDSWLLDEYDRAAASSYLDWIGSALIRHRDGEPLRSGQEDAAAG
SQGEIALHPSSWSVEVRQAAVTPAQDEDSDEAGEQWIDSVYEGKPVPAESPFKEKIKNSL
SWQYSYPSAASHKSKQSVSEMKRQSEVKDEESGSDLVRNLKKPILNRPRFMQEKSMTPAE
RGTAMHMVMQHADLSNPVTEESIERQLAEMKDRELLTDEQVQVIDPALIAGFFQSPLGQR
MRKAARIQREVPFNLALPARTAYPDWKGTEEPVLVQGIIDCIFEDEHGTVLLDYKSDSIH
GRYTGGFEEAMPVLKRRYDVQISLYAKAYEAITKDPVDERYLFFFDGGHILKLE
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagctattattcctccaaagccggagggggcagcctggacagatgaccagtgg
aaggcaatcatggcttcgggccaggatatccttgtggctgcagctgcaggctccggaaaa
acggcagtgctggttgaaaggatcatcaataagatcgtatccagggaagagccggtcaat
gtggatgagctcctcgtcgtgacctttacgaatgcgtctgccgcagagatgaggcacagg
atcggggaggcacttgagaaggcgataaacagggatccgcagtctgcgcatttgcgcaag
cagctcagcctgctgagcagggcttcgatttccactcttcattcattctgccttgaagtg
atccggaaatattattatctgatcgatatcgatcccggcttccgcattgccgatgagaca
gaggggcagctcctcagggatgaagtccttgaagaactgttcgaagaagaatacggcaag
gaaaacaatgaagacttttaccggctggtcgatgctttcacgagcgacaggagtgacaca
gccctccaggatatcatcagggaactgtacgattttgcacggtccaatccggcaccagat
caatatctcgataaaatctcggacatgtacgaagtcagcagtgatgcaaaactggaagag
cttccgttcatgtcaagcgtcttgtttgatatcggactgcagcttgagggagcaaggcag
ctgctggaaaatgcgcttgagcttgccaaaacgcctggcgggcctgctccaagggcagag
aattatatggacgatatcagggcagttgagaccttgattgccgcaaacaatgattcctgg
tccagtttaaatgaagccatgcagctttggagctttggccgtgcgaaaaattgcaaaggc
gatgaatatgatcccgatctggtcaagcaggcccaaaagtatagagataaggcaaagaaa
atgatccaggatctgcaggcggaattcttttcgcgcaggccggaaagcttcatccgggat
attggggagatgaagccgcatatcgatgtactcgtccggctcgtccggtccttttcagag
aaattcaacagtgtgaaaagtgagaagggacttgttgactttgctgatctggagcatttt
tgcctggaaatcctttctgatccttctgcaaggaaggagggagccatcctgccttcagag
ccagctcttacttaccgggaccatttcagggaagtgcttgttgatgaataccaggacacc
aacatggtccaggaagcaatcctgcagctcgtgacgaaggagggggaagagactggcaat
ctgtttatggttggagacgtgaagcaatccatttaccggttcaggctggcagaacccaat
ctgttcctcggcaaatatactcgctttactgtggacggagagaaaacaggattaaagatc
gaccttgcaagaaacttccgcagcagaaaggaagtgcttgacgggaccaacttccttttc
aaacaggtgatgggaaaaaaagtaggggaaatcgattatgaccaggctgccgagcttgta
aagggagcttcgtatcctgaagaccttccgtatcctgttgagcttcatctgatcgacctg
gacggacaggagaaggccgaaagcggggaagcagatgaaacggatgcagggtatgacctt
gaggatctcgagcaatcacagcatgaagcaaggctgatggctgagaaaatcaaagaaatg
ctgtcatccgggaaaaaagtgtatgaaccgaaatcgggagcatatcgtcctttaatgtac
cgcgatattgtcatccttctaaggtcgatgacatgggctccgcagattatggaggaattc
aaaaagcagggaattccgatttatgcaaatctgtcttcaggctattttgaagctaccgag
atcaccattatgatgagccttttaaaagtgatagacaatccgcatcaggatatcccgctt
gcctctgttttgcggtctccgatagtcggccttaacgaagaagagcttgcccagatccgc
atcgccgataaaaagggttcctactatgaagcgatgaaggcattctgtgaaacaaagaaa
agcggggatctgtatgataaagtaaagccgtttttcctggatattgcggaatggagatcg
atggcgaggaaaggcggtctttctgaattgatctggcagctgtaccgggacacgcatttc
tatgactttgccggagggatgcccggcggcaagcaaagacaggctaatctccgggcactg
tatgaccgggcacgccaatatgaggaaacttccttcaggggccttttccgcttcctgcgt
ttcattgaacggatgagggaacggggcgatgaccttggtgcagcgcgcgcactcggcgaa
caggaggatgtggtgaggatgatgaccatccacagcagcaaggggcttgaatttcctgtc
gtctttgctgcaggcctggcaaggcagttcaatacgatggatttgaaaaaaacctatctg
cttgataaggaatacggatttgcggccaaatatgtgaatccggagaagcggatttcctat
ccatccctgccacagcttgcttttaaaaggaaaaagaagatggaaatgctggcagaggaa
atgcgcgttctgtatgtagcactgactcgtgccaaagaacatctttttcttgtggcaagc
gtgaaaaatgcggacaaaaaactggccggctggcagcagggtgccaaaaaagacagctgg
ctgctggatgaatatgaccgggcggctgcttccagctatcttgattggatcggctccgca
cttatccgccaccgggacggggagccactgagaagcgggcaggaggatgccgcagcagga
agccagggagaaatcgctttacatccttcatcctggagcgttgaggtcaggcaggcagcc
gtcactcctgctcaggatgaggacagtgatgaagccggggagcagtggattgacagcgta
tatgaaggcaaaccggtcccggctgagtccccttttaaagaaaaaataaagaattcactt
tcctggcagtacagctacccttccgcagcttcccataagtcaaagcaatctgtctcagaa
atgaagcggcagagtgaagtgaaggatgaagagagcggcagcgatctcgtcaggaatctg
aaaaagccgatcctgaaccggccaaggttcatgcaggagaaatcaatgacacctgccgaa
aggggcacggcgatgcatatggtcatgcagcatgcagacctttccaatccggtgacagaa
gagtccattgagagacaactggcggagatgaaagatcgggagcttctcacggatgagcaa
gtccaggtgatagacccggccctcatcgcgggattcttccaatcgcctcttggccagagg
atgagaaaggctgcaaggatccagcgggaggttcctttcaacctggcattgccggcaaga
accgcctacccggactggaagggcacagaagaaccggtgcttgtccaggggatcattgac
tgcattttcgaggatgagcacggtacagtcctgcttgattataagtctgacagcatccat
gggcgctacacgggcggatttgaggaggcaatgccggtcctcaaaagacggtatgatgtt
cagataagcctgtatgcaaaagcttatgaggctattactaaggaccctgttgatgaaagg
tatctattcttttttgacggaggccatattttaaagctggaatag
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