Bacillus infantis: N288_07870
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Entry
N288_07870 CDS
T02860
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bif
Bacillus infantis
Pathway
bif03420
Nucleotide excision repair
bif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N288_07870
03430 Mismatch repair
N288_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_07870
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N288_07870
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N288_07870
MMR (mismatch excision repair)
Other MMR factors
N288_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
CoiA
Viral_helicase1
AAA_14
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
AGX03504
UniProt:
U5L6P3
LinkDB
All DBs
Position
complement(1426411..1428696)
Genome browser
AA seq
761 aa
AA seq
DB search
MKTAVYRQQTINIDNYSREEFQKIYDEGKKGNLFCPACGERVRMYLGIQASPHFYHLHSN
AECQDAEETLNEVKKEPVEAEISAGGFRLPKSRTITAETMPPPVFQEASFVKTGAPFQSM
PLKNKAASGYLKDLADNGFQLDAAQSAAVSHIDGPLLVLAGAGSGKTRVLTTRTAYMLQE
LRIDPKSIMLVTFTAKAAAEMKRRLIDYPGIKSAQAQQLLAGTFHSIFYRILSFHDREGW
NSQKLLKKEWQREQILKGAAKELKIDEKDFAFDLALQKIGFWKNSLILPQDTKPATDWDK
TVTELYRLYEEYKEIHRLFDFDDMLLGCYRLFQEHPHILESYQNRFHYFLIDEFQDINKV
QYELIKMLSAKSNNVCAVGDDDQSIYAFRGSDPRYLLEFDKDFPAASIVVLDQNYRSAHE
IVSAANSIIVKNKQRRDKKMKAQYSKARKPLLFFPLDEEEEATMIVTDIQEKISQGGSPG
EFALLFRTHAGMRAIFERLANSSLPFRIDQDAESFYDRYLVRTLLAFLKLALDEDSQESI
KNILPALFLKQSVLQDLKAESILTDRTLLECLADVKTGFAFQEKKLARAVPSIRSIKSKS
PAAAIDMIEKELGFNDFLKKRGLEGSSMEKGSDDIRDLKVAANNFESLAEFLEHAEHMRA
MNKEMKKPGNIRDNSITLSTIHRSKGLEYKTVYIIGAVDGSIPHDFALEAYRNGDPDPME
EERRLLYVAVTRAQEELFISVPQKRRGKKARTSRFLAPVRS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgctgtttaccggcaacagactattaatatagataactacagccgcgaagaa
ttccaaaaaatctatgatgaaggaaagaagggcaatcttttctgtcctgcctgcggagag
cgggtgaggatgtacttggggatacaggcttccccccacttctaccatcttcactccaat
gctgaatgccaggatgcagaggagacattgaacgaggtgaaaaaagagccggttgaagcg
gaaatctccgccggcgggttcaggctgcctaaatcgaggacgatcactgctgagacaatg
cctcctcctgtgttccaggaagcttcatttgtaaaaacaggtgcccctttccagtctatg
cctcttaaaaacaaagctgccagcggatacctgaaggatctcgcagacaatggattccaa
ctggatgctgcacaatctgctgctgtatctcatatcgacggacccctgcttgttctggcc
ggggcaggcagcggaaagacgagggttttaaccacccgtactgcttatatgctccaagag
ctgagaatagacccaaaatccatcatgctggttactttcacagctaaagctgctgctgaa
atgaaaagaaggctgattgactatccaggcataaagtctgcccaggcacagcagctcctt
gccggcaccttccacagtattttttaccgcatcctctcctttcatgacagagaaggatgg
aactctcaaaagctgctaaaaaaagaatggcagcgggagcagattttaaaaggggctgca
aaagagctgaaaatcgatgaaaaggactttgctttcgatctggctctgcagaaaatcggt
ttctggaagaactctcttattcttccacaggacacaaaacctgcaactgattgggacaaa
acggttacagaattatacaggctctatgaagaatataaagagattcacaggctcttcgat
tttgatgatatgcttcttggctgttaccgtcttttccaggagcatccccatattctggag
tcttatcaaaaccgctttcactatttccttattgatgaattccaggatatcaataaagtc
cagtatgagctgattaagatgctttccgcaaaaagtaataatgtttgtgcagtcggagat
gatgatcagtctatttatgcgttccggggaagcgaccctcggtatctgctcgaatttgat
aaagatttcccggctgccagcatcgttgtgcttgatcagaactaccgttccgcacatgaa
atcgtgtctgcggccaacagcatcattgtcaaaaacaagcagcggcgcgacaaaaagatg
aaagcccagtattcaaaagcaaggaagcctctcctctttttcccgcttgatgaggaagaa
gaagcgacgatgatcgtgaccgatatccaggagaagatttcccagggcggaagtccaggg
gaatttgcgttattattcaggacccacgcagggatgagggccatttttgaaaggctggcc
aattccagcctgccattcaggattgaccaggatgctgaatcattttacgatcgttattta
gtgaggaccctcctggctttcttaaaattggctcttgatgaggatagccaggaatccatc
aaaaatatcctccctgcgctcttcctgaagcaatctgtactgcaggacttgaaagcagaa
agcatactgaccgacaggactcttctcgagtgccttgctgatgtgaaaacaggatttgct
tttcaggagaaaaagctggcaagggctgtcccatcgattcgttccatcaagtcgaagagt
cctgcagctgccattgatatgatagaaaaagaactcggattcaatgactttcttaaaaaa
cgcgggctggaaggctccagtatggaaaaaggctcagatgatattcgcgatttaaaggtt
gctgccaacaattttgagagcctagcagaatttcttgagcatgccgagcatatgcgcgcc
atgaataaagaaatgaaaaagcccggcaatataagggacaatagcataacactcagtacg
attcaccgctcaaaaggccttgaatataagactgtttatattatcggggctgttgacggg
agcatcccccatgacttcgcccttgaagcttacaggaatggggaccctgacccgatggaa
gaggaaagaaggctattatatgtagcggttacacgggcacaggaggagctgttcatatct
gtcccgcagaaaaggcggggcaaaaaggcgaggacttccaggtttcttgcaccggtaagg
agctaa
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integrated database retrieval system
