Bacillus infantis: N288_09650
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Entry
N288_09650 CDS
T02860
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bif
Bacillus infantis
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bif03032
]
N288_09650
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_09650
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N288_09650
DNA replication proteins [BR:
bif03032
]
Prokaryotic type
DNA Topoisomerases
N288_09650
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N288_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
GH123_cat
Motif
Other DBs
NCBI-ProteinID:
AGX03851
UniProt:
U5LAV6
LinkDB
All DBs
Position
1775618..1777693
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASMGHIRDLPKSQMGVDVENRFEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDMDVHSDCRVVFNEITKDAIKE
SFKTPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIKEFIPEEYWSIDGEFLKGKSVFEASFYSAQGQKTDLKSEQDVKEILGMMKGNKFTVAS
VSKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGSEGTVGLITYMR
TDSTRISEIAQTEAAGYITESYGKDYLPGEKKKETKKSNAQDAHEAIRPTSTLREPASLK
EFLSRDQLRLYKLIWERFVASQMASAIMDTMSVDLKNGEVVFRATGSKVKFPGFMKVYVE
GSDDQAEEKDNMLPDLKEGDEVLKKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTF
APTLDTIQKRGYVALDNKRFIPTELGEIVLELILEFFPEILDVEFTAKMEQDLDDVEDGK
ENWKNIIEEFYKDFEKHLDKAEKEMQEVEIKDEPAGEDCEKCGHEMVYKMGRYGKFMACS
NFPECRNTKAIVKEIGVKCPNCKEGNIIERKSKKRRIFYGCDRFPECEFISWDKPLARQC
PKCDNVLVEKKLKKGVQVQCIECDYKEEKQG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgatcgttgagtcgcctgccaaggcgaagacgattgaaagatac
ttgggaaaaaaatataaagtaagagcatcgatggggcatataagagatctccctaaaagc
cagatgggcgttgatgtggaaaaccgctttgaaccaaaatacatcacgatacgcggcaag
ggccctgtgttgaaagaacttaaaacagctgcaaagaaagccaagaaaatctatctcgca
gctgaccccgatcgcgaaggggaagccattgcctggcatttggcgcacagcctggacatg
gatgtccattctgactgccgtgtggttttcaatgaaatcacaaaggatgccatcaaagaa
tcatttaaaactccgcggccgattaatatggatcttgtggatgcccagcaggcgcgcagg
atcctggacaggctcgtcggctataatataagccctttattatggaagaaagtaaaaaaa
ggattgagcgccggaagggtgcagtcagtggcagtccggctgatcatcgaccgggaaaag
gaaatcaaggaatttatccctgaagaatactggtcaattgatggtgaattcctgaaagga
aagtccgtgttcgaagcgtccttctacagtgcgcagggacagaagacggacttaaaatca
gaacaggatgtaaaagagatcctcggaatgatgaaggggaacaagttcactgttgcttcc
gtctcgaagaaggaacggaaacggaatccagctgctcccttcacaacatcttcccttcag
caggaggcagccaggaaattaaacttcagggctaagaaaacaatgatgcttgcccagcag
ctgtatgagggaattgatcttggttcagaagggacggtcggtctcatcacctatatgaga
acagactcgacccggatctctgaaatcgcacagaccgaggcggcaggctatatcacagag
tcttatggcaaggactatctccctggggagaaaaagaaagaaaccaagaaatccaatgca
caggatgcgcacgaagccatcaggccgacaagcaccctgcgggagccggcaagtcttaaa
gaatttttatcaagagaccagctccgtctgtataaactgatatgggaacgctttgtggca
agccagatggcatccgcaatcatggatacaatgagtgtggatctgaagaacggggaagtt
gtcttccgggccaccggctcaaaagtgaagttccccggctttatgaaggtttatgtcgaa
ggcagcgatgatcaggctgaagaaaaagataatatgctccccgacctgaaggaaggcgat
gaggtcctgaaaaaggacattgagccgaagcagcatttcacccagccgccgccacgctat
acagaggcaaggctggtaaagacactggaagagctcgggatcggaaggccgtcaaccttt
gccccgacactggatacaattcagaaacgcggctatgtagcgcttgataataaacgcttc
atccctacagaacttggagaaatagtcctggaattgattctcgaatttttcccggaaata
ttggatgtcgagtttacggccaagatggagcaggatcttgatgatgtagaagacggcaaa
gaaaattggaagaatatcatcgaagaattctacaaagatttcgagaagcatctggacaaa
gccgaaaaagaaatgcaggaagtagaaataaaggatgagcccgcaggagaagattgtgaa
aaatgcggacatgaaatggtttataaaatggggcgctacggcaagtttatggcctgctcg
aatttccctgaatgcaggaacacaaaagcgattgtgaaagaaatcggtgtgaaatgcccg
aactgcaaagaggggaatataatagaaagaaaaagtaaaaaacgccgcatcttctacggc
tgcgaccggttcccggaatgcgaattcatctcatgggataaaccgcttgccagacagtgt
ccgaaatgcgataatgtcctggttgagaaaaagcttaaaaagggcgtccaggttcaatgc
attgaatgtgactataaagaagaaaagcaaggctaa
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