Bacillus infantis: N288_15875
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Entry
N288_15875 CDS
T02860
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bif
Bacillus infantis
Pathway
bif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N288_15875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bif03019
]
N288_15875
03009 Ribosome biogenesis [BR:
bif03009
]
N288_15875
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N288_15875
Messenger RNA biogenesis [BR:
bif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N288_15875
Ribosome biogenesis [BR:
bif03009
]
Prokaryotic type
rRNA helicases
N288_15875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4422
AAA_30
NDK
Cytochrom_B562
AAA_22
Helicase_RecD
PIN_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGX05065
UniProt:
U5LC75
LinkDB
All DBs
Position
complement(2904842..2906299)
Genome browser
AA seq
485 aa
AA seq
DB search
MTTFSDFNLSKELEKAVSNMGFEEPTPIQAQAIPIGLSGKDMIGQAQTGTGKTTAFGIPL
LEKIDINEGIQGLVLAPTRELAVQVAEELNRIGQVKGVRTLPIYGGQDISRQIRALKKDR
GPHIIAATPGRLIDHIERKTIRLNKIKLAVLDEADEMLNMGFIEDIERILSEVPEQRQTL
LFSATMPRRIQSLAERFMTEPEMVQIKAKELTVKNIEQHYMEVHEKQKFDVLCSLLDIQS
PELAIVFGRTKKRVDEVVEGLIKRGYSAEGIHGDVPQNKRDQVIRRFKEQTIDIMVATDV
AARGLDISGVSHVYNFDIPQDPESYVHRIGRTGRAGKKGLAVTFVSPREIDHLKLIERVT
KTKMAKMPIPTFRDVIAGSQQATINKMMKVIENEEFNEYKRSAENLLEETDSVTLLAAAL
KLLTKEPDITPVKLTAVEPIRSRKPKPKFDRDRSRRTDRGRSGGGGRDRRRGRSGKSGFT
PNSKG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgacaactttttcggattttaatttaagcaaagagcttgaaaaagcagtttccaatatg
ggctttgaagagccgacccctatccaggcgcaggcgatcccgatcggactgagcggaaag
gatatgattggccaggcgcagaccgggacagggaaaaccacagcttttggcattccgctt
cttgaaaagatagacataaatgaagggattcaaggccttgtgctggcgcccacccgcgag
cttgccgtgcaggtggctgaagaactgaaccggattggacaggtgaaaggcgtcaggact
ctgccgatctacggtggacaggacatttccagacagatccgcgccttgaagaaggatcgt
ggaccgcatatcattgcagctactccgggaaggctgattgatcatatcgaaagaaagaca
atccgcctgaataagattaaattggccgtgcttgacgaagctgatgaaatgctgaatatg
ggctttatcgaagatattgagcgcatcctcagcgaagttcctgaacagcgccagaccctg
ctgttttcagcaacaatgccaaggcgcattcaatctttggctgagagattcatgacagag
ccggaaatggttcagattaaagctaaagaacttactgtgaaaaatattgaacagcattat
atggaagtgcatgaaaagcagaagtttgatgtgctctgcagcctgctcgacatccagtcc
ccggaacttgctatcgtgttcggccgcaccaaaaagcgtgtggacgaagtggtggaaggg
cttattaaacgcggctattctgctgaaggcatccatggcgatgttccgcagaataagcgt
gatcaggttatccgccgctttaaagaacagacaatcgatattatggtagcgacagatgta
gctgcaaggggacttgatatcagcggagtttcccatgtttacaactttgatatcccgcag
gatcctgaaagctatgtacaccgcatcgggcggactggccgcgccgggaagaaggggctt
gctgtaacatttgtttcccctcgtgaaatcgatcatctaaagctcattgagcgggtaaca
aaaacaaaaatggcgaagatgccgattcctaccttcagggatgttatcgcaggcagccag
caggcaaccatcaataaaatgatgaaggtcatcgaaaacgaagaattcaacgaatataaa
agatcggcagaaaaccttcttgaggaaacagattcagtcaccctgcttgctgctgcactc
aagctgctgacaaaagagccggatataacacctgttaagcttactgctgtggagccgatc
cgctcaagaaagccgaagccgaagtttgaccgcgacagaagccgccgcaccgacagaggc
aggagcggtggaggcggacgagaccgcagaagaggcagaagcggaaaatcaggttttact
cctaattcaaaggggtaa
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