Bacillus infantis: N288_17225
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Entry
N288_17225 CDS
T02860
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bif
Bacillus infantis
Pathway
bif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N288_17225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bif03019
]
N288_17225
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_17225
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N288_17225
Messenger RNA biogenesis [BR:
bif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N288_17225
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N288_17225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AGX05330
UniProt:
U5LD07
LinkDB
All DBs
Position
complement(3149209..3150708)
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AA seq
499 aa
AA seq
DB search
MATEMMLEKELHRYFGFSSFRKGQREAISSILDGRHTLAMLPTGTGKSICYQLPGYLLEG
TVLIVSPLLSLMQDQVEQMKMNGEKRVVALNSFLSFEEKRWAFDSLQSFKFIFISPEMLN
TASVLNMIKKLRIALFVVDEAHCISQWGYDFRPDYLRLGETRKQLGSPLTLALTATATPE
TVNDIISRLEVESCEQVISSVDRPNISLTVEKHSGYQAKASRLQELVQLFSGPGIIYFSS
KKMAEQAALSLKEKCSKKVMAYHGGMDQESRILIQQQFVNGQIDIVCATSAFGMGINKSD
IRFVVHFHMPLQLESYLQEIGRAGRDGKASAAVLLWAPGDEQLPLQLAEAELPSEHQVDY
VFSLLKTQGLGASELSENEKEIRLPAGLTDIQWRVLTELSDRLRDEGADNLPGRINEFLR
RRVLIKNGQIAEVGRWIHSKSCRREKIAEYFQEGKKPENLSCCDICGLDLGKYFGQAEES
SGLARAGWKELLAGMLINK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaaatgatgcttgaaaaagagctccatagatatttcggcttctcatctttt
agaaaagggcaaagggaggccatttcctccatcctggatggacggcatacactggcaatg
cttccgaccggcacagggaaatccatctgctaccagctgccgggctacttgcttgagggc
actgttctcatcgtttcgccgctcctttccttgatgcaggaccaggtagaacagatgaag
atgaacggtgaaaaaagggtcgttgcactcaattcatttttaagctttgaggaaaagcgc
tgggcttttgacagccttcagagctttaaattcatctttatttctcctgaaatgcttaat
acagcttctgtgctcaatatgatcaagaagctgaggattgcattatttgtagtagatgaa
gcccattgcatttcacagtggggctatgatttcaggccggattatcttcgccttggcgaa
actagaaaacagcttggcagtccgctgacactggcactgacagctaccgcgacacccgag
acagtaaatgatatcatttcaaggcttgaggtggaaagctgtgagcaggtcatttcttct
gtggacaggcccaatatcagcctgactgtcgagaagcacagcggctaccaggcaaaggca
tcaaggctgcaggaacttgttcagctgttcagcggaccggggattatatatttttccagc
aagaaaatggccgaacaggcagctctgtctctaaaagagaaatgctcaaaaaaggtgatg
gcctaccatggcgggatggatcaggaaagccgtatcctgatccagcagcaatttgtaaac
ggccagattgacattgtttgtgccacaagtgctttcggcatggggatcaacaaaagcgat
atccgttttgttgtccacttccatatgcctctccagctggagtcctacctgcaggagatc
gggcgggccggaagggatggcaaagcaagcgcagccgtccttctttgggcgccgggtgat
gagcagctgcccctgcagcttgctgaagctgagcttccttctgaacaccaggttgattac
gttttctccttgcttaaaacgcaggggcttggcgcttcagagctgtcagagaatgaaaaa
gaaatccgcctgcctgcagggctgaccgacattcagtggcgggtgctgaccgagctttct
gacaggctgcgtgatgagggagcggacaatcttcctggcaggatcaatgagtttctccgc
agaagggtccttataaaaaacgggcaaattgcggaagtgggccgctggatccattcgaaa
tcatgccggagggaaaaaatcgcagaatattttcaggaaggcaaaaagcctgaaaatctt
tcctgctgcgatatttgcggtctggatctgggaaaatattttggacaggcagaggaatct
tccggactggccagggctggctggaaagaactccttgccggaatgctaatcaataagtga
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